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  5. Smo51483

Smo51483 (CRR22)


Aliases : CRR22

Description : Pentatricopeptide repeat-containing protein At3g53360, mitochondrial OS=Arabidopsis thaliana


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo51483
Cluster HCCA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
AT5G59200 OTP80 Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g035623 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g048131 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g048224 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g068695 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g089097 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g30904 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g44555 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g27909 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g31162 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g36211 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04438 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04452 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g05739 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g06720 OTP82 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g14743 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g17470 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18999 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g33642 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g58107 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g19301 OTP84 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g23775 DOT4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g27604 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g37552 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g41640 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g23671 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene01654.t1 PTAC9, OSB2,... ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene14838.t1 Aspi01Gene14838 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene23085.t1 Aspi01Gene23085 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene28051.t3 Aspi01Gene28051 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene34532.t1 Aspi01Gene34532 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene34544.t1 Aspi01Gene34544 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene36735.t1 Aspi01Gene36735 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene47938.t1 CRR22, Aspi01Gene47938 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene66051.t1 OTP84, Aspi01Gene66051 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0004.g008511 No alias not classified & original description: CDS=1-792 0.02 OrthoFinder output from all 47 species
Azfi_s0015.g013865 No alias not classified & original description: CDS=1-1626 0.03 OrthoFinder output from all 47 species
Azfi_s0045.g030112 No alias not classified & original description: CDS=94-318 0.02 OrthoFinder output from all 47 species
Cba_g19882 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20689 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.05G099100.1 OTP86, Ceric.05G099100 not classified & original description: pacid=50578500... 0.03 OrthoFinder output from all 47 species
Dcu_g21324 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g38628 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g46395 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g03570 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g03967 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g13628 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g16060 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g18184 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g21688 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g23986 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g50575 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g03753 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g15007 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g15309 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g17343 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g32845 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g44422 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g05475 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_20782g0010 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.02 OrthoFinder output from all 47 species
MA_9463538g0010 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.02 OrthoFinder output from all 47 species
Msp_g43552 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g05576 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g16060 OSB3 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g43235 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g16345 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g46884 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63509 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05882 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g21500 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g29767 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g53384 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g61267 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g61794 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0132.g022190 No alias not classified & original description: CDS=1-2487 0.03 OrthoFinder output from all 47 species
Sam_g01598 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g007850.2.1 Solyc01g007850 Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
Solyc12g099850.1.1 Solyc12g099850 Pentatricopeptide repeat-containing protein At1g18485... 0.03 OrthoFinder output from all 47 species
Spa_g11331 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g12249 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g05666 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g17627 DOT4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g20412 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g28558 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g44244 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007031 peroxisome organization IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 196 243
No external refs found!