Description : Pentatricopeptide repeat-containing protein At1g19720 OS=Arabidopsis thaliana
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00066p00062930 | EMB2261,... | Pentatricopeptide repeat-containing protein At3g49170,... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00103p00113040 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At5g65570... | 0.02 | OrthoFinder output from all 47 species | |
| AT3G22150 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g005800 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g009533 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g011924 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g016117 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g016795 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g066849 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g082266 | OTP82 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g085223 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g086259 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g089164 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g06729 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g42176 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g04109 | EMB2758 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g16335 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene08600.t1 | Aspi01Gene08600 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene10220.t1 | OTP84, Aspi01Gene10220 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0068.g036353 | No alias | not classified & original description: CDS=1-2463 | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g20710 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g23056 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g43239 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g05340 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g12890 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g16894 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g22180 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g23619 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dde_g28404 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g47958 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g50967 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01000719001 | OSB1 | Cell cycle.organelle machineries.DNA... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01009227001 | CRR22 | Pentatricopeptide repeat-containing protein At2g22070... | 0.02 | OrthoFinder output from all 47 species | |
| Gb_34736 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os01g10800.1 | DOT4, LOC_Os01g10800 | Pentatricopeptide repeat-containing protein DOT4,... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os03g59264.1 | LOC_Os03g59264 | lectin chaperone (CRT) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os04g39410.1 | OTP86, LOC_Os04g39410 | RNA editing factor (OTP86) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os05g50950.1 | LOC_Os05g50950 | Pentatricopeptide repeat-containing protein At4g01030,... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g09547 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Len_g23826 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g54500 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g04966 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g05718 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g06733 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g07802 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g14340 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g19879 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g37283 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| MA_27147g0010 | EMB2261 | Pentatricopeptide repeat-containing protein At3g49170,... | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g06724 | OTP86 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g27846 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g15077 | CRR2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g15248 | OSB1 | ssDNA-binding protein *(OSB) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g02850 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g03361 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g58274 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g61389 | OTP86 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g01154 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g18869 | OTP84 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g46357 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g53729 | OTP86 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g61309 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0004.g002209 | No alias | not classified & original description: CDS=347-2416 | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0009.g004577 | No alias | not classified & original description: CDS=1-1743 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0128.g021895 | No alias | not classified & original description: CDS=196-3294 | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g01747 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g11962 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g12389 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g24781 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g50534 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Smo111982 | No alias | Pentatricopeptide repeat-containing protein At5g66520... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc01g098150.3.1 | emb1899, EMB175,... | Pentatricopeptide repeat-containing protein At5g03800... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc09g065840.3.1 | OSB1, Solyc09g065840 | ssDNA-binding protein (OSB) | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g12101 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g56367 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g05579 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g30121 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e007042_P001 | Zm00001e007042 | RNA editing factor (AEF1) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e015440_P001 | CRR22, Zm00001e015440 | Pentatricopeptide repeat-containing protein At3g57430,... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e029186_P001 | Zm00001e029186 | Pentatricopeptide repeat-containing protein At1g19720... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 75 | 122 |
| No external refs found! |
