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  5. Smo68846

Smo68846 (At-RSZ22a, RSZ22a)


Aliases : At-RSZ22a, RSZ22a

Description : RNA processing.RNA splicing.spliceosome-associated non-snRNP factors.RSZ21/22 splicing factor


Gene families : OG0001173 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001173_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo68846

Target Alias Description ECC score Gene Family Method Actions
Adi_g020430 At-RSZ22a, RSZ22a RNA splicing factor *(RSZ21/22) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g13431 At-RSZ22a, RSZ22a RNA splicing factor *(RSZ21/22) & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g48505 At-RSZ22a, RSZ22a not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g06419 RSZ21, At-RSZ21,... RNA splicing factor *(RSZ21/22) & original description: none 0.05 OrthoFinder output from all 47 species
LOC_Os02g39720.2 LOC_Os02g39720 RSZ21/22 RNA splicing factor 0.06 OrthoFinder output from all 47 species
Nbi_g07230 At-RSZ22a, RSZ22a RNA splicing factor *(RSZ21/22) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g12317 At-RSZ22a, RSZ22a RNA splicing factor *(RSZ21/22) & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g29078 RSZ21, At-RSZ21,... RNA splicing factor *(RSZ21/22) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g06025 At-RSZ22a, RSZ22a RNA splicing factor *(RSZ21/22) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g18145 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g66414 At-RSZ22a, RSZ22a RNA splicing factor *(RSZ21/22) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g13208 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g01672 At-RSZ22a, RSZ22a RNA splicing factor *(RSZ21/22) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g22621 At-RSZ22a, RSZ22a RNA splicing factor *(RSZ21/22) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 4 61
No external refs found!