Aliases : ATATM1, ATM1
Description : Solute transport.primary active transport.ABC superfamily.ABC1 family.subfamily ABCB transporter
Gene families : OG0002075 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002075_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Smo75404 | |
| Cluster | HCCA: Cluster_90 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Als_g28533 | ATATM1, ATM1 | subfamily ABCB transporter & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0427.g069288 | ATATM3, STA1, ATM3 | not classified & original description: CDS=1-1653 | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.26G039000.1 | ATATM1, ATM1,... | transport protein ATM of mitochondrial ISC system export... | 0.06 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00021126.3 | ATATM1, ATM1 | ABC transporter B family member 24, mitochondrial... | 0.03 | OrthoFinder output from all 47 species | |
| Cre10.g443000 | ATATM3, STA1, ATM3 | Solute transport.primary active transport.ABC... | 0.01 | OrthoFinder output from all 47 species | |
| Cre12.g561550 | ATATM3, STA1, ATM3 | Solute transport.primary active transport.ABC... | 0.01 | OrthoFinder output from all 47 species | |
| Lfl_g16586 | ATATM1, ATM1 | subfamily ABCB transporter & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Mp1g19940.1 | ATATM1, ATM1 | transport protein ATM of mitochondrial ISC system export... | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g17300 | ATATM3, STA1, ATM3 | subfamily ABCB transporter & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g07593 | ATATM3, STA1, ATM3 | subfamily ABCB transporter & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g07594 | ATATM3, STA1, ATM3 | subfamily ABCB transporter & original description: none | 0.01 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0055085 | transmembrane transport | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| BP | GO:0017038 | protein import | IEP | HCCA |
| MF | GO:0051082 | unfolded protein binding | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR011527 | ABC1_TM_dom | 13 | 223 |
| No external refs found! |
