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  5. Smo78092

Smo78092 (OTP84)


Aliases : OTP84

Description : Pentatricopeptide repeat-containing protein At3g57430, chloroplastic OS=Arabidopsis thaliana


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo78092

Target Alias Description ECC score Gene Family Method Actions
Adi_g004703 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g005619 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g18174 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g18205 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g20072 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g36105 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g30788 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g15319 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g16161 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene02296.t1 Aspi01Gene02296 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene20498.t1 CRR2, Aspi01Gene20498 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene27322.t1 Aspi01Gene27322 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene28051.t1 Aspi01Gene28051 cofactor of plastid-encoded RNA polymerase *(TAC9) &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene36332.t2 Aspi01Gene36332 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene41675.t1 CRR2, Aspi01Gene41675 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene41775.t1 Aspi01Gene41775 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene54509.t1 Aspi01Gene54509 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene65182.t1 OTP86, Aspi01Gene65182 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0001.g000069 No alias not classified & original description: CDS=1-2193 0.06 OrthoFinder output from all 47 species
Azfi_s0008.g011478 No alias not classified & original description: CDS=1-2919 0.03 OrthoFinder output from all 47 species
Azfi_s0069.g036583 No alias not classified & original description: CDS=1-1518 0.03 OrthoFinder output from all 47 species
Azfi_s0128.g048776 No alias not classified & original description: CDS=1-1662 0.03 OrthoFinder output from all 47 species
Cba_g07112 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07190 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20700 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g29524 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g29798 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.14G008900.1 Ceric.14G008900 not classified & original description: pacid=50634493... 0.04 OrthoFinder output from all 47 species
Dde_g07778 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01015461001 ABCG40, PDR12,... Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
GSVIVT01032950001 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
LOC_Os03g60690.1 LPA66, LOC_Os03g60690 Pentatricopeptide repeat-containing protein At4g21065... 0.03 OrthoFinder output from all 47 species
LOC_Os06g02200.1 CRR22, LOC_Os06g02200 RNA editing factor (CRR22) 0.03 OrthoFinder output from all 47 species
LOC_Os07g31000.1 LOC_Os07g31000 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g17565 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07335 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g41230 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g09711 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g12881 RARE1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g18964 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g55721 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pnu_g19965 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0019.g007853 No alias not classified & original description: CDS=1-1137 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0060.g015239 No alias not classified & original description: CDS=1-2529 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0066.g016088 No alias not classified & original description: CDS=1-1020 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0093.g019124 No alias not classified & original description: CDS=1-405 0.05 OrthoFinder output from all 47 species
Sam_g26887 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Smo102603 CRR2 Pentatricopeptide repeat-containing protein At3g12770... 0.02 OrthoFinder output from all 47 species
Smo118770 No alias Pentatricopeptide repeat-containing protein At4g14050,... 0.06 OrthoFinder output from all 47 species
Smo97289 No alias Putative pentatricopeptide repeat-containing protein... 0.05 OrthoFinder output from all 47 species
Smo99647 No alias Pentatricopeptide repeat-containing protein At5g27110... 0.04 OrthoFinder output from all 47 species
Solyc09g090440.1.1 LPA66, Solyc09g090440 Pentatricopeptide repeat-containing protein At5g66520... 0.05 OrthoFinder output from all 47 species
Spa_g06334 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 287 307
No external refs found!