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  5. Smo84108

Smo84108


Description : Putative pentatricopeptide repeat-containing protein At3g49142 OS=Arabidopsis thaliana


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo84108
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00030p00109240 evm_27.TU.AmTr_v1... Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
AMTR_s00092p00078040 No alias Pentatricopeptide repeat-containing protein At4g35130,... 0.03 OrthoFinder output from all 47 species
AT3G47840 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
Als_g18410 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene02394.t1 Aspi01Gene02394 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g35986 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g10909 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g09711 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g47516 OTP85 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g53286 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53705 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0095.g019259 No alias not classified & original description: CDS=1-1518 0.04 OrthoFinder output from all 47 species
Smo101455 CRR22 Pentatricopeptide repeat-containing protein At1g08070,... 0.03 OrthoFinder output from all 47 species
Smo105776 CRR2 Pentatricopeptide repeat-containing protein At3g46790,... 0.03 OrthoFinder output from all 47 species
Smo107192 OTP82 Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
Smo127736 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.05 OrthoFinder output from all 47 species
Smo134581 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
Smo98388 No alias Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
Spa_g06564 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 98 144
No external refs found!