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  5. Smo84280

Smo84280


Description : RNA biosynthesis.transcriptional activation.MYB superfamily.MYB-related transcription factor


Gene families : OG0000160 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000160_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo84280
Cluster HCCA: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00022290 evm_27.TU.AmTr_v1... Transcription factor SRM1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT1G19000 No alias Homeodomain-like superfamily protein 0.05 OrthoFinder output from all 47 species
Adi_g012577 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.03 OrthoFinder output from all 47 species
Als_g06263 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.03 OrthoFinder output from all 47 species
Als_g48089 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene60719.t1 Aspi01Gene60719 MYB-RELATED transcription factor *(MYB-R-R) & original... 0.04 OrthoFinder output from all 47 species
Azfi_s0035.g025525 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.02 OrthoFinder output from all 47 species
Cba_g05005 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.03 OrthoFinder output from all 47 species
Cba_g13543 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.03 OrthoFinder output from all 47 species
Ceric.11G039500.1 Ceric.11G039500 MYB-RELATED transcription factor *(MYB-R-R) & original... 0.04 OrthoFinder output from all 47 species
GSVIVT01005816001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 OrthoFinder output from all 47 species
GSVIVT01035363001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
LOC_Os01g09640.1 LOC_Os01g09640 transcription factor (MYB-related) 0.02 OrthoFinder output from all 47 species
LOC_Os01g63460.1 LOC_Os01g63460 transcription factor (MYB-related) 0.05 OrthoFinder output from all 47 species
Pnu_g26384 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0538.g027475 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.02 OrthoFinder output from all 47 species
Sam_g50035 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.03 OrthoFinder output from all 47 species
Solyc04g005100.3.1 Solyc04g005100 transcription factor (MYB-related) 0.03 OrthoFinder output from all 47 species
Solyc07g026680.2.1 Solyc07g026680 transcription factor (MYB-related) 0.04 OrthoFinder output from all 47 species
Solyc08g078340.3.1 Solyc08g078340 transcription factor (MYB-related) 0.03 OrthoFinder output from all 47 species
Solyc12g044610.2.1 Solyc12g044610 transcription factor (MYB-related) 0.03 OrthoFinder output from all 47 species
Spa_g25282 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.02 OrthoFinder output from all 47 species
Spa_g49345 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 115 159
No external refs found!