Aliases : DCL1, CAF, EMB76, SIN1, ATDCL1, EMB60, SUS1, ASU1
Description : RNA biosynthesis.siRNA biogenesis.DCL-type endoribonuclease
Gene families : OG0000378 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000378_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Smo84784 | |
| Cluster | HCCA: Cluster_37 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT5G45150 | RTL3 | RNAse THREE-like protein 3 | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g18302 | DCL4, ATDCL4 | endoribonuclease (DCL4) of transacting siRNA pathway &... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.01G108700.1 | DCL4, ATDCL4,... | endoribonuclease (DCL4) of transacting siRNA pathway &... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_25982 | DCL1, CAF,... | endoribonuclease component DCL1 of DCL1-HYL1 miRNA... | 0.01 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004525 | ribonuclease III activity | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0019867 | outer membrane | IEP | HCCA |
| CC | GO:0032039 | integrator complex | IEP | HCCA |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |
