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  5. Smo85675

Smo85675


Description : Protein biosynthesis.organelle translation machineries.plastidial ribosome.large subunit proteome.psRPL29 component


Gene families : OG0004758 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004758_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo85675

Target Alias Description ECC score Gene Family Method Actions
Adi_g046030 No alias component *(uL29c) of large plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Adi_g081989 No alias component *(uL29c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Aev_g03513 No alias component *(uL29c) of large plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Ala_g00554 No alias component *(uL29c) of large plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Als_g34521 No alias component *(uL29c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Aob_g00731 No alias component *(uL29c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Aop_g32624 No alias component *(uL29c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Aspi01Gene69557.t1 Aspi01Gene69557 component *(uL29c) of large plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Cba_g00374 No alias component *(uL29c) of large plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Ceric.34G037300.1 Ceric.34G037300 component *(uL29c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Dac_g03965 No alias component *(uL29c) of large plastid ribosomal-subunit... 0.06 OrthoFinder output from all 47 species
Dcu_g13501 No alias component *(uL29c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
LOC_Os02g51790.1 LOC_Os02g51790 component psRPL29 of large ribosomal subunit proteome 0.04 OrthoFinder output from all 47 species
Len_g04060 No alias component *(uL29c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Lfl_g16498 No alias component *(uL29c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
MA_10268152g0010 No alias component psRPL29 of large ribosomal subunit proteome 0.04 OrthoFinder output from all 47 species
Mp4g10390.1 No alias component psRPL29 of large ribosomal subunit proteome 0.04 OrthoFinder output from all 47 species
Msp_g08238 No alias component *(uL29c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Pir_g11029 No alias component *(uL29c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Pp3c15_20650V3.1 Pp3c15_20650 Ribosomal L29 family protein 0.04 OrthoFinder output from all 47 species
Pp3c9_19800V3.1 Pp3c9_19800 Ribosomal L29 family protein 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0022.g008714 No alias component *(uL29c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Sam_g12929 No alias component *(uL29c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Spa_g03535 No alias component *(uL29c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005622 intracellular anatomical structure IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0004089 carbonate dehydratase activity IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0010207 photosystem II assembly IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR001854 Ribosomal_L29/L35 12 68
No external refs found!