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  5. Smo89343

Smo89343


Description : Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo89343
Cluster HCCA: Cluster_47

Target Alias Description ECC score Gene Family Method Actions
Adi_g020508 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g069262 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g083164 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g085311 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g100785 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g30904 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g37552 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s3922.g117339 No alias not classified & original description: CDS=1-831 0.02 OrthoFinder output from all 47 species
Cre12.g483700 OSB4 Cell cycle.organelle machineries.DNA... 0.02 OrthoFinder output from all 47 species
Ehy_g12413 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g13253 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g41736 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g42752 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g06265 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo136503 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
Smo26969 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004150 dihydroneopterin aldolase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016832 aldehyde-lyase activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 165 211
No external refs found!