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  5. Smo91949

Smo91949


Description : Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo91949

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00244370 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At3g05340... 0.03 OrthoFinder output from all 47 species
AMTR_s00032p00145640 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At2g22070... 0.03 OrthoFinder output from all 47 species
Adi_g052049 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g099164 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g34933 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g46737 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g02454 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g03700 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g20559 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g27909 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g37258 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g05010 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g05250 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g17002 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g30148 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g30469 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g04634 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene31801.t1 Aspi01Gene31801 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene34698.t1 Aspi01Gene34698 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene60910.t1 Aspi01Gene60910 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0301.g063688 CRR2 not classified & original description: CDS=1-1323 0.04 OrthoFinder output from all 47 species
Cba_g09310 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g13662 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.05G039500.1 Ceric.05G039500 not classified & original description: pacid=50577997... 0.04 OrthoFinder output from all 47 species
Ceric.38G035700.1 Ceric.38G035700 not classified & original description: pacid=50579678... 0.06 OrthoFinder output from all 47 species
Dcu_g05682 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g06339 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g07120 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g08536 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g08616 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g33116 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g39483 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g43746 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g43978 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g44186 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g05762 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g49909 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g21772 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ehy_g22835 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01000034001 MEF19 Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
GSVIVT01033906001 No alias Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
LOC_Os06g40860.1 LOC_Os06g40860 Pentatricopeptide repeat-containing protein At1g03540... 0.03 OrthoFinder output from all 47 species
Lfl_g04986 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g07089 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07823 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g32796 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g33317 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_102449g0020 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.04 OrthoFinder output from all 47 species
Msp_g27109 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Msp_g28496 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g34246 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g41118 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g45873 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g47672 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g10208 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Nbi_g10283 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g32187 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g12697 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g42021 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g44735 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g16176 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g23581 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g30620 OTP82 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g22056 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g43237 VAC1, ECB2, ATECB2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g53565 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g55596 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g16744 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g17282 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g51436 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo76175 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 OrthoFinder output from all 47 species
Solyc03g096610.2.1 Solyc03g096610 Pentatricopeptide repeat-containing protein At1g33350... 0.03 OrthoFinder output from all 47 species
Spa_g05402 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g06334 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g18196 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g21307 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g27690 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g33712 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g54818 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e031693_P001 Zm00001e031693 Pentatricopeptide repeat-containing protein At4g14050,... 0.03 OrthoFinder output from all 47 species
Zm00001e041694_P001 Zm00001e041694 Pentatricopeptide repeat-containing protein At5g16860... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 141 171
No external refs found!