Smo92017 (ATSS4, SS4, SSIV)

Aliases : ATSS4, SS4, SSIV

Description : Carbohydrate metabolism.starch metabolism.synthesis.starch synthase activities.SSIV-type starch synthase

Gene families : OG0000693 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000693_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Smo92017
Cluster	HCCA: Cluster_64

Target	Alias	Description	ECC score	Gene Family Method
Aop_g02255	ATSS4, SS4, SSIV	starch synthase *(SS4) & original description: none	0.02	OrthoFinder output from all 47 species
Azfi_s0003.g007652	ATSS3, SS3	starch synthase *(SS3) & original description: CDS=201-2645	0.03	OrthoFinder output from all 47 species
Cre13.g579598	ATSS3, SS3	Carbohydrate metabolism.starch...	0.03	OrthoFinder output from all 47 species
Dac_g10971	ATSS4, SS4, SSIV	starch synthase *(SS4) & original description: none	0.02	OrthoFinder output from all 47 species
Lfl_g24346	ATSS3, SS3	starch synthase *(SS3) & original description: none	0.02	OrthoFinder output from all 47 species
Mp1g14910.1	ATSS4, SS4, SSIV	starch synthase (SSIV)	0.02	OrthoFinder output from all 47 species
Pir_g02313	ATSS3, SS3	starch synthase *(SS3) & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g14771	ATSS4, SS4, SSIV	starch synthase *(SS5) & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

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Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0005509	calcium ion binding	IEP	HCCA
MF	GO:0008134	transcription factor binding	IEP	HCCA
MF	GO:0017025	TBP-class protein binding	IEP	HCCA
MF	GO:0140296	general transcription initiation factor binding	IEP	HCCA

No InterPro domains available for this sequence

External Links

No external refs found!