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  5. Smo92414

Smo92414 (ATCRY2, CRY2, PHH1,...)


Aliases : ATCRY2, CRY2, PHH1, AT-PHH1, FHA

Description : External stimuli response.light.UV-A/blue light.cryptochrome-mediated photoperception.CRY cryptochrome photoreceptor


Gene families : OG0000814 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000814_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo92414
Cluster HCCA: Cluster_75

Target Alias Description ECC score Gene Family Method Actions
AT4G08920 HY4, ATCRY1,... cryptochrome 1 0.05 OrthoFinder output from all 47 species
Ala_g20548 HY4, ATCRY1,... cryptochrome photoreceptor *(CRY) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g21204 HY4, ATCRY1,... cryptochrome photoreceptor *(CRY) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g46007 HY4, ATCRY1,... cryptochrome photoreceptor *(CRY) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g13732 HY4, ATCRY1,... cryptochrome photoreceptor *(CRY) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.32G056000.1 HY4, ATCRY1,... cryptochrome photoreceptor *(CRY) & original... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021579.19 ATCRY2, CRY2,... Cryptochrome-1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Dcu_g20214 HY4, ATCRY1,... cryptochrome photoreceptor *(CRY) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g02909 HY4, ATCRY1,... cryptochrome photoreceptor *(CRY) & original description: none 0.02 OrthoFinder output from all 47 species
Mp2g17590.1 HY4, ATCRY1,... cryptochrome photoreceptor (CRY) 0.06 OrthoFinder output from all 47 species
Pnu_g02063 HY4, ATCRY1,... cryptochrome photoreceptor *(CRY) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g15157 HY4, ATCRY1,... cryptochrome photoreceptor *(CRY) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g41422 HY4, ATCRY1,... cryptochrome photoreceptor *(CRY) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g04124 HY4, ATCRY1,... cryptochrome photoreceptor *(CRY) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e014894_P002 HY4, ATCRY1,... cryptochrome photoreceptor (CRY) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0004089 carbonate dehydratase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
BP GO:0019321 pentose metabolic process IEP HCCA
BP GO:0019566 arabinose metabolic process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0046373 L-arabinose metabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR005101 Cryptochr/Photolyase_FAD-bd 295 491
No external refs found!