Aliases : EMB2758
Description : Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00137p00065490 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.04 | OrthoFinder output from all 47 species | |
| AT3G20730 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g018868 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g074695 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g081057 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g07716 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g32888 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g38515 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g16809 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g25466 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g09042 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g18705 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g22716 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g30519 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene22844.t1 | Aspi01Gene22844 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0016.g014413 | No alias | not classified & original description: CDS=1-1530 | 0.05 | OrthoFinder output from all 47 species | |
| Azfi_s0573.g078051 | No alias | not classified & original description: CDS=1-1146 | 0.06 | OrthoFinder output from all 47 species | |
| Cba_g05956 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Cba_g19875 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g47996 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g21802 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g37997 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01008922001 | No alias | Pentatricopeptide repeat-containing protein At4g08210... | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01030248001 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os08g04400.1 | LOC_Os08g04400 | Pentatricopeptide repeat-containing protein At5g50390,... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os11g29360.1 | OTP82, LOC_Os11g29360 | Pentatricopeptide repeat-containing protein At5g66520... | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g40816 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g02080 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g15565 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g27549 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g29230 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ore_g41304 | OTP86 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g06170 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g56487 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0021.g008323 | No alias | not classified & original description: CDS=476-3628 | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0140.g022681 | OTP82 | not classified & original description: CDS=1-954 | 0.06 | OrthoFinder output from all 47 species | |
| Sam_g24891 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Smo134463 | No alias | Pentatricopeptide repeat-containing protein At2g22070... | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e000621_P001 | CRR22, Zm00001e000621 | Pentatricopeptide repeat-containing protein At3g12770... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e014549_P001 | CRR22, Zm00001e014549 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e040855_P003 | Zm00001e040855 | Pentatricopeptide repeat-containing protein At2g37320... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0009058 | biosynthetic process | IEP | HCCA |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| MF | GO:0016788 | hydrolase activity, acting on ester bonds | IEP | HCCA |
| BP | GO:0018130 | heterocycle biosynthetic process | IEP | HCCA |
| BP | GO:0019438 | aromatic compound biosynthetic process | IEP | HCCA |
| BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | HCCA |
| BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | HCCA |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 147 | 171 |
| No external refs found! |
