Smo92610


Description : Pentatricopeptide repeat-containing protein At5g56310 OS=Arabidopsis thaliana


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo92610

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00008p00153950 evm_27.TU.AmTr_v1... RNA processing.organelle machineries.RNA... 0.02 OrthoFinder output from all 47 species
AMTR_s00098p00167700 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g50390,... 0.03 OrthoFinder output from all 47 species
Adi_g004526 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g008833 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g014239 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g015420 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g015809 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g017104 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g019220 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g034364 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g056821 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g058156 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g066118 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g067305 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g067822 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g087163 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g099122 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g115360 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g30904 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g44555 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g07420 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g07498 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g09167 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g17512 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g21667 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g23789 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g37274 DOT4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04216 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04452 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g05672 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06359 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07100 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g14142 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g14743 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g18405 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g26781 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g28460 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g06038 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27916 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g31975 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g34282 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g36684 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g37552 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g32922 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene19894.t1 Aspi01Gene19894 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene20498.t1 CRR2, Aspi01Gene20498 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene23472.t1 CRR22, Aspi01Gene23472 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene28051.t3 Aspi01Gene28051 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene34532.t1 Aspi01Gene34532 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene66051.t1 OTP84, Aspi01Gene66051 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0004.g008511 No alias not classified & original description: CDS=1-792 0.02 OrthoFinder output from all 47 species
Azfi_s0007.g011042 No alias not classified & original description: CDS=1-2970 0.02 OrthoFinder output from all 47 species
Azfi_s0033.g025053 VAC1, ECB2, ATECB2 not classified & original description: CDS=1-2580 0.04 OrthoFinder output from all 47 species
Azfi_s0652.g081079 No alias not classified & original description: CDS=1-2169 0.02 OrthoFinder output from all 47 species
Cba_g03394 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g05331 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g06588 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g07170 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g15873 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g19293 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g34641 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g69088 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.10G047400.1 OTP84, Ceric.10G047400 not classified & original description: pacid=50612794... 0.03 OrthoFinder output from all 47 species
Ceric.22G020200.1 Ceric.22G020200 not classified & original description: pacid=50615278... 0.03 OrthoFinder output from all 47 species
Ceric.22G050700.1 Ceric.22G050700 not classified & original description: pacid=50614024... 0.03 OrthoFinder output from all 47 species
Ceric.25G047500.1 Ceric.25G047500 not classified & original description: pacid=50594463... 0.02 OrthoFinder output from all 47 species
Dac_g12583 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g14167 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g43237 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08431 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g20608 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g21324 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g37529 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g38628 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g46395 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g47943 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g01734 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g05938 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g09625 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g15730 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g16894 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g21688 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g22008 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g15341 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g19886 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g03293 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g16432 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g18535 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g04986 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07378 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07793 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g39111 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_184088g0010 No alias Pentatricopeptide repeat-containing protein At3g09040,... 0.04 OrthoFinder output from all 47 species
MA_385322g0010 OTP82 Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
Msp_g03121 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g15026 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g43552 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g04955 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g13927 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g08923 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g17481 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g26310 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g29294 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g40238 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g40943 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g42021 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g43235 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g01995 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g12795 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13291 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g31141 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g57666 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g63861 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g07606 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g11074 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g29479 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g33169 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g33170 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g33298 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g39236 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g53175 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g54934 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g55046 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g62370 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0013.g005702 No alias not classified & original description: CDS=46-1077 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0040.g012420 No alias not classified & original description: CDS=519-2384 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0057.g014767 OTP84 not classified & original description: CDS=399-2006 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0170.g024361 OTP84 cyclin-dependent kinase inhibitor *(KRP/ICK) & original... 0.02 OrthoFinder output from all 47 species
Sam_g03326 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g07845 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g12231 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g29372 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g19945 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g27799 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g33712 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g32428 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0005488 binding IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 10 54
No external refs found!