Description : External stimuli response.light.UV-A/blue light.cryptochrome-mediated photoperception.CIB transcriptional regulator
Gene families : OG0000019 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Smo93546 | |
| Cluster | HCCA: Cluster_9 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00065p00184910 | LRL1,... | RNA biosynthesis.transcriptional activation.bHLH... | 0.03 | OrthoFinder output from all 47 species | |
| Als_g10626 | LRL3 | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g50421 | No alias | regulatory protein (CIB) of blue light perception &... | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g11398 | SPT | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.17G079100.1 | Ceric.17G079100 | bHLH-type transcription factor & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g08372 | LRL3 | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01007389001 | No alias | External stimuli response.light.UV-A/blue... | 0.02 | OrthoFinder output from all 47 species | |
| Gb_33185 | No alias | transcription factor (bHLH). transcriptional regulator (CIB) | 0.04 | OrthoFinder output from all 47 species | |
| MA_50630g0010 | LRL3 | transcription factor (bHLH) | 0.03 | OrthoFinder output from all 47 species | |
| Mp1g19210.1 | No alias | transcription factor (bHLH) | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g14482 | No alias | bHLH-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Solyc09g097870.4.1 | Solyc09g097870 | transcription factor (bHLH). transcriptional regulator (CIB) | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0046983 | protein dimerization activity | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0005622 | intracellular anatomical structure | IEP | HCCA |
| MF | GO:0008017 | microtubule binding | IEP | HCCA |
| MF | GO:0008092 | cytoskeletal protein binding | IEP | HCCA |
| MF | GO:0015631 | tubulin binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR011598 | bHLH_dom | 43 | 90 |
| No external refs found! |
