Description : Thylakoid lumenal protein TL20.3, chloroplastic OS=Arabidopsis thaliana
Gene families : OG0006152 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006152_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Smo96317 | |
| Cluster | HCCA: Cluster_78 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G12250 | No alias | Pentapeptide repeat-containing protein | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g015162 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g08842 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Als_g02920 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Aop_g58664 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Aspi01Gene30712.t1 | Aspi01Gene30712 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g13925 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Dcu_g06102 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g11753 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g04356 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| GSVIVT01001267001 | No alias | Thylakoid lumenal protein TL20.3, chloroplastic... | 0.06 | OrthoFinder output from all 47 species | |
| Gb_01023 | No alias | Thylakoid lumenal protein TL20.3, chloroplastic... | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os02g42960.1 | LOC_Os02g42960 | Thylakoid lumenal protein TL20.3, chloroplastic... | 0.02 | OrthoFinder output from all 47 species | |
| MA_8855586g0010 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g07925 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g18142 | No alias | not classified & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| Pp3c21_17930V3.1 | Pp3c21_17930 | Pentapeptide repeat-containing protein | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g16845 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0003.g001784 | No alias | not classified & original description: CDS=1-996 | 0.05 | OrthoFinder output from all 47 species | |
| Tin_g10553 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004089 | carbonate dehydratase activity | IEP | HCCA |
| MF | GO:0004109 | coproporphyrinogen oxidase activity | IEP | HCCA |
| BP | GO:0006553 | lysine metabolic process | IEP | HCCA |
| BP | GO:0008652 | amino acid biosynthetic process | IEP | HCCA |
| BP | GO:0009066 | aspartate family amino acid metabolic process | IEP | HCCA |
| BP | GO:0009067 | aspartate family amino acid biosynthetic process | IEP | HCCA |
| BP | GO:0009085 | lysine biosynthetic process | IEP | HCCA |
| BP | GO:0009089 | lysine biosynthetic process via diaminopimelate | IEP | HCCA |
| CC | GO:0009521 | photosystem | IEP | HCCA |
| CC | GO:0009522 | photosystem I | IEP | HCCA |
| CC | GO:0009654 | photosystem II oxygen evolving complex | IEP | HCCA |
| BP | GO:0010207 | photosystem II assembly | IEP | HCCA |
| BP | GO:0016053 | organic acid biosynthetic process | IEP | HCCA |
| MF | GO:0016301 | kinase activity | IEP | HCCA |
| MF | GO:0016627 | oxidoreductase activity, acting on the CH-CH group of donors | IEP | HCCA |
| MF | GO:0016634 | oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor | IEP | HCCA |
| MF | GO:0016835 | carbon-oxygen lyase activity | IEP | HCCA |
| MF | GO:0016836 | hydro-lyase activity | IEP | HCCA |
| BP | GO:0022607 | cellular component assembly | IEP | HCCA |
| CC | GO:0032991 | protein-containing complex | IEP | HCCA |
| BP | GO:0043648 | dicarboxylic acid metabolic process | IEP | HCCA |
| BP | GO:0043933 | protein-containing complex organization | IEP | HCCA |
| BP | GO:0044283 | small molecule biosynthetic process | IEP | HCCA |
| BP | GO:0046394 | carboxylic acid biosynthetic process | IEP | HCCA |
| BP | GO:0046451 | diaminopimelate metabolic process | IEP | HCCA |
| MF | GO:0051536 | iron-sulfur cluster binding | IEP | HCCA |
| MF | GO:0051537 | 2 iron, 2 sulfur cluster binding | IEP | HCCA |
| MF | GO:0051540 | metal cluster binding | IEP | HCCA |
| BP | GO:0065003 | protein-containing complex assembly | IEP | HCCA |
| CC | GO:0098796 | membrane protein complex | IEP | HCCA |
| BP | GO:1901605 | alpha-amino acid metabolic process | IEP | HCCA |
| BP | GO:1901607 | alpha-amino acid biosynthetic process | IEP | HCCA |
| CC | GO:1990204 | oxidoreductase complex | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001646 | 5peptide_repeat | 72 | 108 |
| No external refs found! |
