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  5. Smo98727

Smo98727 (ASK1, ATSKP1, UIP1,...)


Aliases : ASK1, ATSKP1, UIP1, SKP1, SKP1A

Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.Cullin-based ubiquitylation complexes.SKP1-CUL1-FBX (SCF) E3 ligase complexes.SKP1/ASK1 target protein binding component


Gene families : OG0000379 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000379_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo98727

Target Alias Description ECC score Gene Family Method Actions
AT1G75950 ASK1, ATSKP1,... S phase kinase-associated protein 1 0.01 OrthoFinder output from all 47 species
AT2G25700 ASK3, SK3 SKP1-like 3 0.02 OrthoFinder output from all 47 species
AT3G21860 ASK10, SK10 SKP1-like 10 0.02 OrthoFinder output from all 47 species
AT4G34470 SK12, ASK12 SKP1-like 12 0.04 OrthoFinder output from all 47 species
Ceric.20G070900.1 ASK1, ATSKP1,... ASK-type linker component of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Ceric.20G072300.1 ASK2, SKP1B,... ASK-type linker component of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Dac_g41160 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_09569 ASK11, SK11 target protein binding component SKP1/ASK1 of... 0.02 OrthoFinder output from all 47 species
LOC_Os07g05150.1 ASK2, SKP1B,... target protein binding component SKP1/ASK1 of... 0.03 OrthoFinder output from all 47 species
LOC_Os07g05160.1 ASK4, SK4, LOC_Os07g05160 target protein binding component SKP1/ASK1 of... 0.03 OrthoFinder output from all 47 species
LOC_Os07g05180.1 ASK2, SKP1B,... target protein binding component SKP1/ASK1 of... 0.03 OrthoFinder output from all 47 species
LOC_Os07g43270.1 ASK1, ATSKP1,... target protein binding component SKP1/ASK1 of... 0.04 OrthoFinder output from all 47 species
LOC_Os08g28800.1 ASK1, ATSKP1,... target protein binding component SKP1/ASK1 of... 0.02 OrthoFinder output from all 47 species
LOC_Os08g28820.1 ASK1, ATSKP1,... target protein binding component SKP1/ASK1 of... 0.03 OrthoFinder output from all 47 species
LOC_Os09g10270.1 ASK4, SK4, LOC_Os09g10270 target protein binding component SKP1/ASK1 of... 0.02 OrthoFinder output from all 47 species
Nbi_g29347 ASK2, SKP1B ASK-type linker component of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Ppi_g09622 ASK2, SKP1B ASK-type linker component of SCF E3 ubiquitin ligase... 0.05 OrthoFinder output from all 47 species
Solyc10g055580.2.1 ASK2, SKP1B,... target protein binding component SKP1/ASK1 of... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006511 ubiquitin-dependent protein catabolic process IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0006825 copper ion transport IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0035434 copper ion transmembrane transport IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR016073 Skp1_comp_POZ 3 61
No external refs found!