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  5. Solyc00g500062.1.1

Solyc00g500062.1.1 (PSBG, Solyc00g500062)


Aliases : PSBG, Solyc00g500062

Description : component NdhK of NDH subcomplex A


Gene families : OG0002329 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002329_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc00g500062.1.1
Cluster HCCA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00102p00107760 PSBG,... Photosynthesis.photophosphorylation.chlororespiration.NAD... 0.11 OrthoFinder output from all 47 species
ATCG00430 PSBG photosystem II reaction center protein G 0.35 OrthoFinder output from all 47 species
Aev_g09763 PSBG component *(NdhK) of NDH subcomplex A & original... 0.3 OrthoFinder output from all 47 species
Als_g14164 PSBG component *(NdhK) of NDH subcomplex A & original... 0.1 OrthoFinder output from all 47 species
Azfi_s0026.g023371 PSBG not classified & original description: CDS=1-972 0.09 OrthoFinder output from all 47 species
Ceric.02G013800.1 PSBG, Ceric.02G013800 component *(NdhK) of NDH subcomplex A & original... 0.17 OrthoFinder output from all 47 species
Ceric.09G048200.1 PSBG, Ceric.09G048200 component *(NdhK) of NDH subcomplex A & original... 0.06 OrthoFinder output from all 47 species
Ceric.10G060900.1 PSBG, Ceric.10G060900 component *(NdhK) of NDH subcomplex A & original... 0.06 OrthoFinder output from all 47 species
Ceric.1Z109800.1 PSBG, Ceric.1Z109800 component *(NdhK) of NDH subcomplex A & original... 0.13 OrthoFinder output from all 47 species
Ceric.1Z161800.1 PSBG, Ceric.1Z161800 component *(NdhK) of NDH subcomplex A & original... 0.1 OrthoFinder output from all 47 species
Ceric.29G033100.1 PSBG, Ceric.29G033100 component *(NdhK) of NDH subcomplex A & original... 0.03 OrthoFinder output from all 47 species
Gb_14100 PSBG NAD(P)H-quinone oxidoreductase subunit K, chloroplastic... 0.13 OrthoFinder output from all 47 species
Gb_18611 PSBG component NdhK of NDH subcomplex A 0.13 OrthoFinder output from all 47 species
Gb_28626 PSBG component NdhK of NDH subcomplex A 0.13 OrthoFinder output from all 47 species
LOC_Os01g58022.1 PSBG, LOC_Os01g58022 component NdhK of NDH subcomplex A 0.08 OrthoFinder output from all 47 species
LOC_Os06g22010.1 PSBG, LOC_Os06g22010 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic... 0.03 OrthoFinder output from all 47 species
Lfl_g05990 PSBG component *(NdhK) of NDH subcomplex A & original... 0.19 OrthoFinder output from all 47 species
Smo4549 PSBG Photosynthesis.photophosphorylation.chlororespiration.NAD... 0.21 OrthoFinder output from all 47 species
Smo4550 PSBG Photosynthesis.photophosphorylation.chlororespiration.NAD... 0.21 OrthoFinder output from all 47 species
Solyc00g500141.1.1 PSBG, Solyc00g500141 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic... 0.04 OrthoFinder output from all 47 species
Zm00001e042032_P001 PSBG, Zm00001e042032 component NdhK of NDH subcomplex A 0.06 OrthoFinder output from all 47 species
Zm00001e042053_P001 PSBG, Zm00001e042053 component NdhK of NDH subcomplex A 0.03 OrthoFinder output from all 47 species
Zm00001e042079_P001 PSBG, Zm00001e042079 component NdhK of NDH subcomplex A 0.06 OrthoFinder output from all 47 species
Zm00001e042097_P001 PSBG, Zm00001e042097 component NdhK of NDH subcomplex A 0.06 OrthoFinder output from all 47 species
Zm00001e042149_P001 PSBG, Zm00001e042149 component NdhK of NDH subcomplex A 0.06 OrthoFinder output from all 47 species
Zm00001e042352_P001 PSBG, Zm00001e042352 component NdhK of NDH subcomplex A 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0051536 iron-sulfur cluster binding IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003954 NADH dehydrogenase activity IEP HCCA
MF GO:0003955 NAD(P)H dehydrogenase (quinone) activity IEP HCCA
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009579 thylakoid IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0015453 oxidoreduction-driven active transmembrane transporter activity IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
BP GO:0017004 cytochrome complex assembly IEP HCCA
MF GO:0020037 heme binding IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
CC GO:0031361 obsolete integral component of thylakoid membrane IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
InterPro domains Description Start Stop
IPR006137 NADH_UbQ_OxRdtase-like_20kDa 74 182
No external refs found!