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  5. Solyc00g500228.1.1

Solyc00g500228.1.1 (RPL2, Solyc00g500228)


Aliases : RPL2, Solyc00g500228

Description : component mtRPL2-N-terminal of large ribosomal subunit proteome


Gene families : OG0011618 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0011618_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc00g500228.1.1
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00272550 RPL2,... Protein biosynthesis.organelle translation... 0.03 OrthoFinder output from all 47 species
AMTR_s00235p00022890 evm_27.TU.AmTr_v1... Protein biosynthesis.organelle translation... 0.02 OrthoFinder output from all 47 species
AT2G07715 No alias Nucleic acid-binding, OB-fold-like protein 0.09 OrthoFinder output from all 47 species
ATMG00560 RPL2 Nucleic acid-binding, OB-fold-like protein 0.11 OrthoFinder output from all 47 species
Gb_28089 RPL2 component mtRPL2-N-terminal of large ribosomal subunit... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0017004 cytochrome complex assembly IEP HCCA
MF GO:0020037 heme binding IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR022666 Rbsml_prot_L2_RNA-bd_dom 19 73
No external refs found!