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  5. Solyc01g005370.3.1

Solyc01g005370.3.1 (Solyc01g005370)


Aliases : Solyc01g005370

Description : Probable calcium-binding protein CML25 OS=Arabidopsis thaliana (sp|q9fyk2|cml25_arath : 170.0)


Gene families : OG0000383 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000383_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g005370.3.1
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00041p00030040 evm_27.TU.AmTr_v1... Probable calcium-binding protein CML10 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
AMTR_s00126p00123680 evm_27.TU.AmTr_v1... Calmodulin-like protein 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Adi_g057947 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g35023 No alias calcium sensor *(CML) & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g00581 No alias calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene40436.t1 TCH2, CML24,... calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene67143.t1 Aspi01Gene67143 calcium sensor *(CML) & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene67146.t1 Aspi01Gene67146 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g24003 No alias calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.18G030200.1 Ceric.18G030200 calcium sensor *(CML) & original description:... 0.02 OrthoFinder output from all 47 species
Ehy_g14735 No alias calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g30390 TCH2, CML24 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01008421001 No alias Calcium-binding allergen Ole e 8 OS=Olea europaea 0.02 OrthoFinder output from all 47 species
LOC_Os05g13580.1 LOC_Os05g13580 Probable calcium-binding protein CML18 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
Len_g13533 No alias calcium sensor *(CML) & original description: none 0.01 OrthoFinder output from all 47 species
Len_g47228 No alias calcium sensor *(CML) & original description: none 0.01 OrthoFinder output from all 47 species
Len_g54649 No alias calcium sensor *(CML) & original description: none 0.01 OrthoFinder output from all 47 species
Mp5g15630.1 No alias Probable calcium-binding protein CML10 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
Pir_g18745 CML41 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g33634 No alias calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0291.g027172 No alias calcium sensor *(CML) & original description: CDS=1-882 0.01 OrthoFinder output from all 47 species
Spa_g09952 No alias calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g14324 No alias calcium sensor *(CML) & original description: none 0.01 OrthoFinder output from all 47 species
Tin_g45182 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e016987_P001 Zm00001e016987 Probable calcium-binding protein CML16 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
Zm00001e031549_P001 Zm00001e031549 Probable calcium-binding protein CML15 OS=Oryza sativa... 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0042910 xenobiotic transmembrane transporter activity IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 105 167
IPR002048 EF_hand_dom 31 92
No external refs found!