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  5. Solyc01g005985.1.1

Solyc01g005985.1.1 (Solyc01g005985)


Aliases : Solyc01g005985

Description : xylogen-type arabinogalactan protein


Gene families : OG0000195 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000195_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g005985.1.1
Cluster HCCA: Cluster_131

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00240480 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 OrthoFinder output from all 47 species
AMTR_s00002p00272110 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00002p00272120 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 OrthoFinder output from all 47 species
AMTR_s00013p00038620 LTPG1,... Cell wall.cutin and suberin.export.LTPG cuticular lipid... 0.04 OrthoFinder output from all 47 species
AMTR_s00048p00225010 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.hydroxyproline-rich... 0.02 OrthoFinder output from all 47 species
AT1G05450 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.04 OrthoFinder output from all 47 species
AT1G55260 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.08 OrthoFinder output from all 47 species
AT1G73890 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.06 OrthoFinder output from all 47 species
AT2G48140 EDA4 Bifunctional inhibitor/lipid-transfer protein/seed... 0.05 OrthoFinder output from all 47 species
AT3G22580 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 OrthoFinder output from all 47 species
AT3G22600 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 OrthoFinder output from all 47 species
AT3G22620 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.06 OrthoFinder output from all 47 species
AT3G43720 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.11 OrthoFinder output from all 47 species
AT3G58550 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.07 OrthoFinder output from all 47 species
AT4G14815 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.04 OrthoFinder output from all 47 species
AT5G13900 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.05 OrthoFinder output from all 47 species
Adi_g116254 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g17169 No alias arabinogalactan protein *(Xylogen) & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g04739 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g23852 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g06034 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g07275 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g15133 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene02338.t1 Aspi01Gene02338 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene12060.t1 Aspi01Gene12060 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene13486.t1 Aspi01Gene13486 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene33061.t1 Aspi01Gene33061 arabinogalactan protein *(Xylogen) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene44733.t1 Aspi01Gene44733 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene50807.t1 Aspi01Gene50807 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene68013.t1 Aspi01Gene68013 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0011.g012661 LTPG1 not classified & original description: CDS=60-632 0.03 OrthoFinder output from all 47 species
Azfi_s0054.g033620 No alias not classified & original description: CDS=175-666 0.03 OrthoFinder output from all 47 species
Azfi_s0803.g087563 No alias arabinogalactan protein *(Xylogen) & original... 0.03 OrthoFinder output from all 47 species
Ceric.01G082200.1 Ceric.01G082200 not classified & original description: pacid=50591603... 0.07 OrthoFinder output from all 47 species
Dcu_g06089 LTPG1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g11056 No alias arabinogalactan protein *(Xylogen) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01001178001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 OrthoFinder output from all 47 species
GSVIVT01001181001 EDA4 No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01008272001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 OrthoFinder output from all 47 species
GSVIVT01018009001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 OrthoFinder output from all 47 species
GSVIVT01018010001 No alias No description available 0.04 OrthoFinder output from all 47 species
GSVIVT01025413001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 OrthoFinder output from all 47 species
GSVIVT01029796001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.05 OrthoFinder output from all 47 species
GSVIVT01032956001 No alias Lipid transfer-like protein VAS OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
Gb_01917 No alias classical arabinogalactan protein 0.05 OrthoFinder output from all 47 species
Gb_02441 No alias xylogen-type arabinogalactan protein 0.05 OrthoFinder output from all 47 species
Gb_02443 No alias xylogen-type arabinogalactan protein 0.07 OrthoFinder output from all 47 species
Gb_02454 No alias xylogen-type arabinogalactan protein 0.06 OrthoFinder output from all 47 species
Gb_02455 No alias xylogen-type arabinogalactan protein 0.02 OrthoFinder output from all 47 species
Gb_02457 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Gb_02458 No alias xylogen-type arabinogalactan protein 0.07 OrthoFinder output from all 47 species
Gb_06123 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Gb_06428 No alias xylogen-type arabinogalactan protein 0.08 OrthoFinder output from all 47 species
Gb_08579 No alias xylogen-type arabinogalactan protein 0.05 OrthoFinder output from all 47 species
Gb_24349 No alias xylogen-type arabinogalactan protein 0.06 OrthoFinder output from all 47 species
Gb_33140 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os01g59870.1 LOC_Os01g59870 xylogen-type arabinogalactan protein 0.04 OrthoFinder output from all 47 species
LOC_Os03g57970.2 LOC_Os03g57970 xylogen-type arabinogalactan protein 0.03 OrthoFinder output from all 47 species
LOC_Os03g57980.1 LOC_Os03g57980 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os03g57990.1 LOC_Os03g57990 xylogen-type arabinogalactan protein 0.05 OrthoFinder output from all 47 species
LOC_Os03g58940.1 LOC_Os03g58940 xylogen-type arabinogalactan protein 0.08 OrthoFinder output from all 47 species
LOC_Os06g49770.1 LOC_Os06g49770 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os07g07790.1 LOC_Os07g07790 xylogen-type arabinogalactan protein 0.03 OrthoFinder output from all 47 species
LOC_Os07g07860.1 LOC_Os07g07860 xylogen-type arabinogalactan protein 0.03 OrthoFinder output from all 47 species
LOC_Os07g07920.1 EDA4, LOC_Os07g07920 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os10g11370.1 LOC_Os10g11370 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g14614 No alias arabinogalactan protein *(Xylogen) & original description: none 0.02 OrthoFinder output from all 47 species
Len_g59470 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_113140g0010 No alias no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
MA_115537g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_124502g0010 No alias xylogen-type arabinogalactan protein 0.05 OrthoFinder output from all 47 species
MA_1925g0010 No alias no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
MA_19325g0010 No alias xylogen-type arabinogalactan protein 0.04 OrthoFinder output from all 47 species
MA_383975g0010 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
MA_494876g0010 No alias xylogen-type arabinogalactan protein 0.05 OrthoFinder output from all 47 species
MA_50191g0010 No alias no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
MA_5581g0010 No alias xylogen-type arabinogalactan protein 0.12 OrthoFinder output from all 47 species
MA_64802g0020 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
MA_71069g0010 No alias xylogen-type arabinogalactan protein 0.02 OrthoFinder output from all 47 species
MA_76307g0020 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_9903145g0010 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Msp_g06695 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g06696 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g27615 No alias arabinogalactan protein *(Xylogen) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g28322 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g04354 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g17108 No alias arabinogalactan protein *(Xylogen) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g23357 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g44457 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g61681 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0056.g014611 No alias arabinogalactan protein *(Xylogen) & original... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0073.g017064 No alias arabinogalactan protein *(Xylogen) & original... 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0169.g024327 No alias not classified & original description: CDS=1-432 0.03 OrthoFinder output from all 47 species
Sam_g02332 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g33803 No alias arabinogalactan protein *(Xylogen) & original description: none 0.04 OrthoFinder output from all 47 species
Solyc01g103060.4.1 Solyc01g103060 Lipid transfer-like protein VAS OS=Arabidopsis thaliana... 0.09 OrthoFinder output from all 47 species
Solyc03g005200.3.1 Solyc03g005200 xylogen-type arabinogalactan protein 0.05 OrthoFinder output from all 47 species
Solyc03g005210.4.1 Solyc03g005210 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc03g119620.1.1 Solyc03g119620 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc06g054030.2.1 Solyc06g054030 xylogen-type arabinogalactan protein 0.05 OrthoFinder output from all 47 species
Solyc06g054060.1.1 Solyc06g054060 xylogen-type arabinogalactan protein 0.04 OrthoFinder output from all 47 species
Solyc09g065410.4.1 Solyc09g065410 xylogen-type arabinogalactan protein 0.06 OrthoFinder output from all 47 species
Solyc09g065420.3.1 Solyc09g065420 xylogen-type arabinogalactan protein 0.04 OrthoFinder output from all 47 species
Solyc09g065430.4.1 Solyc09g065430 xylogen-type arabinogalactan protein 0.06 OrthoFinder output from all 47 species
Solyc09g065440.4.1 EDA4, Solyc09g065440 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc09g082280.3.1 Solyc09g082280 xylogen-type arabinogalactan protein 0.06 OrthoFinder output from all 47 species
Solyc09g082290.3.1 Solyc09g082290 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Solyc09g082300.3.1 EDA4, Solyc09g082300 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Spa_g11499 No alias arabinogalactan protein *(Xylogen) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g25113 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g30752 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g13589 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g22068 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e000506_P001 Zm00001e000506 xylogen-type arabinogalactan protein 0.04 OrthoFinder output from all 47 species
Zm00001e001853_P001 Zm00001e001853 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e005336_P001 Zm00001e005336 xylogen-type arabinogalactan protein 0.03 OrthoFinder output from all 47 species
Zm00001e005959_P003 Zm00001e005959 xylogen-type arabinogalactan protein 0.04 OrthoFinder output from all 47 species
Zm00001e005960_P003 EDA4, Zm00001e005960 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e005961_P001 Zm00001e005961 xylogen-type arabinogalactan protein 0.04 OrthoFinder output from all 47 species
Zm00001e006054_P001 Zm00001e006054 xylogen-type arabinogalactan protein 0.06 OrthoFinder output from all 47 species
Zm00001e011462_P001 Zm00001e011462 xylogen-type arabinogalactan protein 0.03 OrthoFinder output from all 47 species
Zm00001e011463_P001 Zm00001e011463 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e011883_P002 Zm00001e011883 xylogen-type arabinogalactan protein 0.03 OrthoFinder output from all 47 species
Zm00001e028880_P001 Zm00001e028880 xylogen-type arabinogalactan protein 0.07 OrthoFinder output from all 47 species
Zm00001e032912_P001 Zm00001e032912 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e038813_P001 Zm00001e038813 xylogen-type arabinogalactan protein 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR016140 Bifunc_inhib/LTP/seed_store 26 108
No external refs found!