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  5. Solyc01g006770.2.1

Solyc01g006770.2.1 (Solyc01g006770)


Aliases : Solyc01g006770

Description : no hits & (original description: none)


Gene families : OG0000352 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000352_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g006770.2.1
Cluster HCCA: Cluster_46

Target Alias Description ECC score Gene Family Method Actions
AT5G12460 No alias Protein of unknown function (DUF604) 0.05 OrthoFinder output from all 47 species
Als_g47455 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene27633.t1 Aspi01Gene27633 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene59501.t1 Aspi01Gene59501 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene59505.t1 Aspi01Gene59505 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0186.g056707 No alias not classified & original description: CDS=722-1846 0.04 OrthoFinder output from all 47 species
Ceric.31G043300.1 Ceric.31G043300 not classified & original description: pacid=50574070... 0.03 OrthoFinder output from all 47 species
GSVIVT01024903001 No alias No description available 0.05 OrthoFinder output from all 47 species
Gb_04360 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Gb_04629 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Gb_12418 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_39622 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os02g31210.1 LOC_Os02g31210 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os03g16290.1 LOC_Os03g16290 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os03g16334.1 LOC_Os03g16334 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g45927 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10431764g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_66888g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Ore_g37540 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g42679 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0021.g008392 No alias not classified & original description: CDS=1-1902 0.03 OrthoFinder output from all 47 species
Sam_g09207 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc09g011090.3.1 Solyc09g011090 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Solyc11g065440.3.1 Solyc11g065440 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc11g065470.2.1 Solyc11g065470 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc12g005730.2.1 Solyc12g005730 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc12g056200.2.1 Solyc12g056200 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc12g099680.1.1 Solyc12g099680 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
Solyc12g099690.1.1 Solyc12g099690 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc12g099730.3.1 Solyc12g099730 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e007164_P001 Zm00001e007164 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e038263_P001 Zm00001e038263 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0008146 sulfotransferase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
InterPro domains Description Start Stop
IPR006740 DUF604 218 471
No external refs found!