Aliases : ATHDA14, hda14, Solyc01g009120
Description : class-II histone deacetylase
Gene families : OG0006068 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006068_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Solyc01g009120.3.1 | |
| Cluster | HCCA: Cluster_121 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00054p00095350 | ATHDA14, hda14,... | Chromatin organisation.histone modifications.histone... | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g03857 | ATHDA14, hda14 | class-II histone deacetylase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g53688 | ATHDA14, hda14 | class-II histone deacetylase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g17399 | ATHDA14, hda14 | class-II histone deacetylase & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g38945 | ATHDA14, hda14 | class-II histone deacetylase & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dde_g00560 | ATHDA14, hda14 | class-II histone deacetylase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os12g08220.1 | ATHDA14, hda14,... | class-II histone deacetylase | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g05964 | ATHDA14, hda14 | class-II histone deacetylase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g18920 | ATHDA14, hda14 | class-II histone deacetylase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g19601 | ATHDA14, hda14 | class-II histone deacetylase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g10669 | ATHDA14, hda14 | class-II histone deacetylase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g52168 | No alias | class-II histone deacetylase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g09807 | ATHDA14, hda14 | class-II histone deacetylase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g11637 | ATHDA14, hda14 | class-II histone deacetylase & original description: none | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0006790 | sulfur compound metabolic process | IEP | HCCA |
| MF | GO:0015399 | primary active transmembrane transporter activity | IEP | HCCA |
| BP | GO:0016226 | iron-sulfur cluster assembly | IEP | HCCA |
| MF | GO:0016887 | ATP hydrolysis activity | IEP | HCCA |
| BP | GO:0022607 | cellular component assembly | IEP | HCCA |
| BP | GO:0031163 | metallo-sulfur cluster assembly | IEP | HCCA |
| MF | GO:0042626 | ATPase-coupled transmembrane transporter activity | IEP | HCCA |
| MF | GO:0046914 | transition metal ion binding | IEP | HCCA |
| MF | GO:0051536 | iron-sulfur cluster binding | IEP | HCCA |
| MF | GO:0051540 | metal cluster binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR023801 | His_deacetylse_dom | 122 | 425 |
| No external refs found! |
