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  5. Solyc01g028800.3.1

Solyc01g028800.3.1 (APUM12, PUM12, Solyc01g028800)


Aliases : APUM12, PUM12, Solyc01g028800

Description : Pumilio homolog 12 OS=Arabidopsis thaliana (sp|q9lvc3|pum12_arath : 395.0)


Gene families : OG0000858 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000858_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Solyc01g028800.3.1

Target Alias Description ECC score Gene Family Method Actions
Als_g03238 APUM12, PUM12 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene49914.t1 APUM12, PUM12,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01009020001 PUM7, APUM7 Putative pumilio homolog 7, chloroplastic OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR001313 Pumilio_RNA-bd_rpt 536 570
IPR001313 Pumilio_RNA-bd_rpt 609 632
IPR001313 Pumilio_RNA-bd_rpt 460 494
IPR001313 Pumilio_RNA-bd_rpt 502 533
IPR001313 Pumilio_RNA-bd_rpt 684 706
IPR001313 Pumilio_RNA-bd_rpt 574 594
No external refs found!