Solyc01g056570.3.1 (Solyc01g056570)


Aliases : Solyc01g056570

Description : Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana (sp|q9fn03|uvr8_arath : 108.0)


Gene families : OG0004502 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004502_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g056570.3.1

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene01305.t1 Aspi01Gene01305 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cre02.g089274 No alias Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Dcu_g03184 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01022462001 No alias Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Ppi_g56938 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g16161 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo163545 No alias Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Spa_g18876 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071805 potassium ion transmembrane transport IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR020683 DUF3447 46 123
IPR000408 Reg_chr_condens 262 309
IPR000408 Reg_chr_condens 313 363
IPR000408 Reg_chr_condens 203 256
IPR000408 Reg_chr_condens 152 199
No external refs found!