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  5. Solyc01g057770.3.1

Solyc01g057770.3.1 (Solyc01g057770)


Aliases : Solyc01g057770

Description : borate transporter (BOR)


Gene families : OG0000669 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000669_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g057770.3.1
Cluster HCCA: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00203390 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.APC... 0.03 OrthoFinder output from all 47 species
AMTR_s00052p00085150 ATBOR4, BOR4,... Solute transport.carrier-mediated transport.APC... 0.04 OrthoFinder output from all 47 species
Aev_g44112 No alias borate transporter *(BOR) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g07949 No alias borate transporter *(BOR) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g19089 No alias borate transporter *(BOR) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g05732 No alias borate transporter *(BOR) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g13939 No alias borate transporter *(BOR) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18991 ATBOR4, BOR4 borate transporter *(BOR) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g38653 BOR1 borate transporter *(BOR) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g62993 No alias borate transporter *(BOR) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene28026.t1 Aspi01Gene28026 borate transporter *(BOR) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene46823.t1 Aspi01Gene46823 borate transporter *(BOR) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s2343.g110699 No alias borate transporter *(BOR) & original description: CDS=1112-2932 0.02 OrthoFinder output from all 47 species
Cba_g04720 No alias borate transporter *(BOR) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g38264 No alias borate transporter *(BOR) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.21G003300.1 Ceric.21G003300 borate transporter *(BOR) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.29G013800.1 Ceric.29G013800 borate transporter *(BOR) & original description:... 0.02 OrthoFinder output from all 47 species
Dac_g12787 No alias borate transporter *(BOR) & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g25865 No alias borate transporter *(BOR) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g19672 No alias borate transporter *(BOR) & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01017223001 ATBOR4, BOR4 Solute transport.carrier-mediated transport.APC... 0.05 OrthoFinder output from all 47 species
GSVIVT01017647001 No alias Solute transport.carrier-mediated transport.APC... 0.04 OrthoFinder output from all 47 species
Gb_14917 ATBOR4, BOR4 borate transporter (BOR) 0.07 OrthoFinder output from all 47 species
MA_103776g0010 No alias borate transporter (BOR) 0.03 OrthoFinder output from all 47 species
MA_41101g0010 No alias borate transporter (BOR) 0.04 OrthoFinder output from all 47 species
Msp_g16022 No alias borate transporter *(BOR) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g03809 No alias borate transporter *(BOR) & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g17853 No alias borate transporter *(BOR) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g40239 BOR1 borate transporter *(BOR) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g02119 No alias borate transporter *(BOR) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g06939 No alias borate transporter *(BOR) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g11158 No alias borate transporter *(BOR) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0078.g017717 No alias borate transporter *(BOR) & original description: CDS=1-1821 0.03 OrthoFinder output from all 47 species
Spa_g11196 No alias borate transporter *(BOR) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e016734_P002 ATBOR4, BOR4,... borate transporter (BOR) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006820 monoatomic anion transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0005992 trehalose biosynthetic process IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
CC GO:0031012 extracellular matrix IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR011531 HCO3_transpt-like_TM_dom 5 179
IPR011531 HCO3_transpt-like_TM_dom 202 372
IPR011531 HCO3_transpt-like_TM_dom 460 550
No external refs found!