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  5. Solyc01g060280.4.1

Solyc01g060280.4.1 (AMSH1, Solyc01g060280)


Aliases : AMSH1, Solyc01g060280

Description : deubiquitinase (AMSH)


Gene families : OG0001591 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001591_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g060280.4.1

Target Alias Description ECC score Gene Family Method Actions
AT1G48790 AMSH1 associated molecule with the SH3 domain of STAM 1 0.03 OrthoFinder output from all 47 species
Ceric.14G002000.1 AMSH1, Ceric.14G002000 deubiquitinase *(AMSH) & original description:... 0.03 OrthoFinder output from all 47 species
Dcu_g08515 AMSH2 deubiquitinase *(AMSH) & original description: none 0.03 OrthoFinder output from all 47 species
MA_106719g0010 AMSH1 deubiquitinase (AMSH) 0.03 OrthoFinder output from all 47 species
Mp1g14340.1 AMSH1 deubiquitinase (AMSH) 0.02 OrthoFinder output from all 47 species
Sam_g29894 No alias deubiquitinase *(AMSH) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g50734 AMSH1 deubiquitinase *(AMSH) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e026340_P001 AMSH1, Zm00001e026340 deubiquitinase (AMSH) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000555 JAMM/MPN+_dom 81 188
No external refs found!