Solyc01g067800.3.1 (Solyc01g067800)

Aliases : Solyc01g067800

Description : RING-v-class E3 ligase

Gene families : OG0000484 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000484_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc01g067800.3.1

Target	Alias	Description	ECC score	Gene Family Method
AT2G34200	No alias	RING/FYVE/PHD zinc finger superfamily protein	0.02	OrthoFinder output from all 47 species
Len_g08952	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g44335	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Solyc09g011770.3.1	Solyc09g011770	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
Spa_g06347	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g25001	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0006629	lipid metabolic process	IEP	HCCA
BP	GO:0016042	lipid catabolic process	IEP	HCCA
MF	GO:0016627	oxidoreductase activity, acting on the CH-CH group of donors	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR011016	Znf_RING-CH	217	263

External Links

No external refs found!