Solyc01g068240.3.1 (UBP24, Solyc01g068240)

Aliases : UBP24, Solyc01g068240

Description : deubiquitinase (UBP24)

Gene families : OG0005424 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005424_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc01g068240.3.1
Cluster	HCCA: Cluster_19

Target	Alias	Description	ECC score	Gene Family Method
Ala_g02261	UBP24	deubiquitinase *(UBP24) & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g04470	UBP24	deubiquitinase *(UBP24) & original description: none	0.04	OrthoFinder output from all 47 species
Ceric.28G047700.1	UBP24, Ceric.28G047700	deubiquitinase *(UBP24) & original description:...	0.02	OrthoFinder output from all 47 species
LOC_Os07g46660.1	UBP24, LOC_Os07g46660	deubiquitinase (UBP24)	0.02	OrthoFinder output from all 47 species
Mp3g13650.1	UBP24	deubiquitinase (UBP24)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0016579	protein deubiquitination	IEA	Interproscan
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0070646	protein modification by small protein removal	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000774	adenyl-nucleotide exchange factor activity	IEP	HCCA
MF	GO:0004812	aminoacyl-tRNA ligase activity	IEP	HCCA
BP	GO:0006399	tRNA metabolic process	IEP	HCCA
BP	GO:0006418	tRNA aminoacylation for protein translation	IEP	HCCA
BP	GO:0006457	protein folding	IEP	HCCA
MF	GO:0016874	ligase activity	IEP	HCCA
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	IEP	HCCA
BP	GO:0022613	ribonucleoprotein complex biogenesis	IEP	HCCA
MF	GO:0030554	adenyl nucleotide binding	IEP	HCCA
BP	GO:0042254	ribosome biogenesis	IEP	HCCA
MF	GO:0042802	identical protein binding	IEP	HCCA
MF	GO:0042803	protein homodimerization activity	IEP	HCCA
BP	GO:0043038	amino acid activation	IEP	HCCA
BP	GO:0043039	tRNA aminoacylation	IEP	HCCA
BP	GO:0044085	cellular component biogenesis	IEP	HCCA
MF	GO:0051087	chaperone binding	IEP	HCCA
MF	GO:0060590	ATPase regulator activity	IEP	HCCA
MF	GO:0140101	catalytic activity, acting on a tRNA	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001394	Peptidase_C19_UCH	182	530

External Links

No external refs found!