Aliases : Solyc01g073800
Description : no hits & (original description: none)
Gene families : OG0000892 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000892_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Solyc01g073800.2.1 | |
| Cluster | HCCA: Cluster_124 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00012p00263580 | evm_27.TU.AmTr_v1... | No description available | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00022p00036270 | evm_27.TU.AmTr_v1... | No description available | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00030p00098310 | evm_27.TU.AmTr_v1... | No description available | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00044p00069570 | evm_27.TU.AmTr_v1... | No description available | 0.06 | OrthoFinder output from all 47 species | |
| AT2G17740 | No alias | Cysteine/Histidine-rich C1 domain family protein | 0.11 | OrthoFinder output from all 47 species | |
| AT2G27660 | No alias | Cysteine/Histidine-rich C1 domain family protein | 0.11 | OrthoFinder output from all 47 species | |
| AT2G37805 | No alias | No description available | 0.06 | OrthoFinder output from all 47 species | |
| AT2G37820 | No alias | Cysteine/Histidine-rich C1 domain family protein | 0.04 | OrthoFinder output from all 47 species | |
| AT2G42060 | No alias | Cysteine/Histidine-rich C1 domain family protein | 0.07 | OrthoFinder output from all 47 species | |
| AT2G44370 | No alias | Cysteine/Histidine-rich C1 domain family protein | 0.06 | OrthoFinder output from all 47 species | |
| AT2G44390 | No alias | Cysteine/Histidine-rich C1 domain family protein | 0.04 | OrthoFinder output from all 47 species | |
| AT2G44400 | No alias | Cysteine/Histidine-rich C1 domain family protein | 0.06 | OrthoFinder output from all 47 species | |
| AT5G43520 | No alias | Cysteine/Histidine-rich C1 domain family protein | 0.06 | OrthoFinder output from all 47 species | |
| Aev_g19331 | No alias | E3 ubiquitin ligase *(AIRP1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene11277.t1 | Aspi01Gene11277 | E3 ubiquitin ligase *(AIRP1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0408.g068454 | No alias | not classified & original description: CDS=95-1408 | 0.08 | OrthoFinder output from all 47 species | |
| Ceric.16G051800.1 | Ceric.16G051800 | E3 ubiquitin ligase *(AIRP1) & original description:... | 0.06 | OrthoFinder output from all 47 species | |
| Ceric.18G064000.1 | Ceric.18G064000 | E3 ubiquitin ligase *(AIRP1) & original description:... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.33G006200.1 | Ceric.33G006200 | not classified & original description: pacid=50606483... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.33G006500.1 | Ceric.33G006500 | E3 ubiquitin ligase *(AIRP1) & original description:... | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g10112 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g36226 | No alias | E3 ubiquitin ligase *(AIRP1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01034093001 | No alias | No description available | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os07g41910.1 | LOC_Os07g41910 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os07g41980.1 | LOC_Os07g41980 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os07g42040.1 | LOC_Os07g42040 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| MA_18827g0010 | No alias | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| MA_18827g0020 | No alias | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| MA_4432g0010 | No alias | no hits & (original description: none) | 0.09 | OrthoFinder output from all 47 species | |
| Msp_g44989 | No alias | E3 ubiquitin ligase *(AIRP1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g60934 | No alias | E3 ubiquitin ligase *(AIRP1) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0009.g004401 | No alias | not classified & original description: CDS=1-1194 | 0.05 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0063.g015605 | No alias | not classified & original description: CDS=1-1329 | 0.05 | OrthoFinder output from all 47 species | |
| Solyc01g073780.2.1 | Solyc01g073780 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| Solyc01g073890.3.1 | Solyc01g073890 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| Solyc02g068680.1.1 | Solyc02g068680 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| Solyc04g082940.3.1 | Solyc04g082940 | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
| Solyc06g072460.1.1 | Solyc06g072460 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| Solyc08g014370.1.1 | Solyc08g014370 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc09g011260.2.1 | Solyc09g011260 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g21651 | AtAIRP1, AIRP1 | E3 ubiquitin ligase *(AIRP1) & original description: none | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | HCCA |
| MF | GO:0005215 | transporter activity | IEP | HCCA |
| MF | GO:0005216 | monoatomic ion channel activity | IEP | HCCA |
| BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
| BP | GO:0006952 | defense response | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
| BP | GO:0010215 | cellulose microfibril organization | IEP | HCCA |
| BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
| MF | GO:0015267 | channel activity | IEP | HCCA |
| MF | GO:0015276 | ligand-gated monoatomic ion channel activity | IEP | HCCA |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
| MF | GO:0022803 | passive transmembrane transporter activity | IEP | HCCA |
| MF | GO:0022834 | ligand-gated channel activity | IEP | HCCA |
| MF | GO:0022836 | gated channel activity | IEP | HCCA |
| MF | GO:0022839 | monoatomic ion gated channel activity | IEP | HCCA |
| MF | GO:0022857 | transmembrane transporter activity | IEP | HCCA |
| BP | GO:0030198 | extracellular matrix organization | IEP | HCCA |
| CC | GO:0031225 | obsolete anchored component of membrane | IEP | HCCA |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
| BP | GO:0043062 | extracellular structure organization | IEP | HCCA |
| MF | GO:0043565 | sequence-specific DNA binding | IEP | HCCA |
| BP | GO:0045229 | external encapsulating structure organization | IEP | HCCA |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
| MF | GO:0051536 | iron-sulfur cluster binding | IEP | HCCA |
| MF | GO:0051540 | metal cluster binding | IEP | HCCA |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
| MF | GO:0140110 | transcription regulator activity | IEP | HCCA |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
| No external refs found! |
