1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc01g079470.4.1

Solyc01g079470.4.1 (CP12-1, CP12, Solyc01g079470)


Aliases : CP12-1, CP12, Solyc01g079470

Description : no hits & (original description: none)


Gene families : OG0002170 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002170_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g079470.4.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00175560 CP12, CP12-2,... Calvin cycle protein CP12-2, chloroplastic... 0.06 OrthoFinder output from all 47 species
Adi_g106137 CP12-1, CP12 regulatory protein *(CP12) of GAPDH activity & original... 0.02 OrthoFinder output from all 47 species
Ala_g00257 CP12, CP12-2 regulatory protein *(CP12) of GAPDH activity & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene63650.t1 CP12, CP12-2,... regulatory protein *(CP12) of GAPDH activity & original... 0.03 OrthoFinder output from all 47 species
Dcu_g40442 CP12, CP12-2 regulatory protein *(CP12) of GAPDH activity & original... 0.02 OrthoFinder output from all 47 species
Dde_g03082 CP12, CP12-2 regulatory protein *(CP12) of GAPDH activity & original... 0.02 OrthoFinder output from all 47 species
Ehy_g14018 CP12, CP12-2 regulatory protein *(CP12) of GAPDH activity & original... 0.02 OrthoFinder output from all 47 species
LOC_Os01g19740.1 CP12-1, CP12,... Calvin cycle protein CP12-2, chloroplastic... 0.1 OrthoFinder output from all 47 species
Len_g42311 CP12-1, CP12 regulatory protein *(CP12) of GAPDH activity & original... 0.03 OrthoFinder output from all 47 species
Mp2g10550.1 CP12-3 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ore_g08879 CP12-1, CP12 regulatory protein *(CP12) of GAPDH activity & original... 0.04 OrthoFinder output from all 47 species
Ore_g22166 CP12-1, CP12 regulatory protein *(CP12) of GAPDH activity & original... 0.05 OrthoFinder output from all 47 species
Pp3c21_11130V3.1 CP12-1, CP12,... CP12 domain-containing protein 2 0.01 OrthoFinder output from all 47 species
Ppi_g53465 CP12-1, CP12 regulatory protein *(CP12) of GAPDH activity & original... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0098.g019505 CP12, CP12-2 regulatory protein *(CP12) of GAPDH activity & original... 0.03 OrthoFinder output from all 47 species
Smo105078 CP12-1, CP12 Calvin cycle protein CP12-1, chloroplastic... 0.03 OrthoFinder output from all 47 species
Spa_g00117 CP12-1, CP12 regulatory protein *(CP12) of GAPDH activity & original... 0.02 OrthoFinder output from all 47 species
Zm00001e036178_P001 CP12-1, CP12,... Calvin cycle protein CP12-2, chloroplastic... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003697 single-stranded DNA binding IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP HCCA
MF GO:0045735 nutrient reservoir activity IEP HCCA
InterPro domains Description Start Stop
IPR003823 CP12_dom 55 123
No external refs found!