Aliases : NF-YC3, Solyc01g079870
Description : component NF-YC of NF-Y transcription factor complex
Gene families : OG0001038 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001038_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Solyc01g079870.4.1 | |
| Cluster | HCCA: Cluster_77 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00004p00270830 | NF-YC3,... | RNA biosynthesis.transcriptional activation.NF-Y... | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g05830 | HAP5A, NF-YC1, ATHAP5A | component *(NF-YC) of NF-Y transcription factor complex... | 0.02 | OrthoFinder output from all 47 species | |
| MA_9929143g0010 | NF-YC2, ATHAP5B, HAP5B | component NF-YC of NF-Y transcription factor complex | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g11136 | NF-YC2, ATHAP5B, HAP5B | component *(NF-YC) of NF-Y transcription factor complex... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e024345_P001 | NF-YC3, Zm00001e024345 | component NF-YC of NF-Y transcription factor complex | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e039944_P001 | NF-YC2, ATHAP5B,... | component NF-YC of NF-Y transcription factor complex | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | HCCA |
| MF | GO:0005198 | structural molecule activity | IEP | HCCA |
| MF | GO:0008483 | transaminase activity | IEP | HCCA |
| MF | GO:0010011 | auxin binding | IEP | HCCA |
| MF | GO:0016701 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen | IEP | HCCA |
| MF | GO:0016702 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | IEP | HCCA |
| MF | GO:0016769 | transferase activity, transferring nitrogenous groups | IEP | HCCA |
| MF | GO:0019843 | rRNA binding | IEP | HCCA |
| CC | GO:0030117 | membrane coat | IEP | HCCA |
| CC | GO:0030118 | clathrin coat | IEP | HCCA |
| CC | GO:0030120 | vesicle coat | IEP | HCCA |
| CC | GO:0030125 | clathrin vesicle coat | IEP | HCCA |
| CC | GO:0030130 | clathrin coat of trans-Golgi network vesicle | IEP | HCCA |
| CC | GO:0030132 | clathrin coat of coated pit | IEP | HCCA |
| MF | GO:0042562 | hormone binding | IEP | HCCA |
| MF | GO:0051213 | dioxygenase activity | IEP | HCCA |
| CC | GO:0098797 | plasma membrane protein complex | IEP | HCCA |
| MF | GO:0140110 | transcription regulator activity | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR003958 | CBFA_NFYB_domain | 102 | 165 |
| No external refs found! |
