Aliases : EIF3B-2, ATEIF3B-2, EIF3B, Solyc01g088370
Description : component eIF3b of eIF3 mRNA-to-PIC binding complex
Gene families : OG0004558 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004558_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Solyc01g088370.3.1 | |
| Cluster | HCCA: Cluster_19 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Aev_g01392 | EIF3B-2, ATEIF3B-2, EIF3B | component *(eIF3b) of eIF3 mRNA-to-PIC binding complex &... | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g13421 | EIF3B-2, ATEIF3B-2, EIF3B | component *(eIF3b) of eIF3 mRNA-to-PIC binding complex &... | 0.05 | OrthoFinder output from all 47 species | |
| Azfi_s0538.g076306 | EIF3B-2, ATEIF3B-2, EIF3B | component *(eIF3b) of eIF3 mRNA-to-PIC binding complex &... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.14G030700.1 | EIF3B-2,... | component *(eIF3b) of eIF3 mRNA-to-PIC binding complex &... | 0.05 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00020848.60 | EIF3B-2, ATEIF3B-2, EIF3B | Protein biosynthesis.translation... | 0.05 | OrthoFinder output from all 47 species | |
| Cre03.g190100 | EIF3B-2, ATEIF3B-2, EIF3B | Protein biosynthesis.translation... | 0.06 | OrthoFinder output from all 47 species | |
| Dac_g01727 | EIF3B-2, ATEIF3B-2, EIF3B | component *(eIF3b) of eIF3 mRNA-to-PIC binding complex &... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g11466 | EIF3B-2, ATEIF3B-2, EIF3B | component *(eIF3b) of eIF3 mRNA-to-PIC binding complex &... | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g04954 | EIF3B-2, ATEIF3B-2, EIF3B | component *(eIF3b) of eIF3 mRNA-to-PIC binding complex &... | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01036012001 | ATTIF3B1,... | Protein biosynthesis.translation... | 0.08 | OrthoFinder output from all 47 species | |
| LOC_Os10g41960.1 | ATTIF3B1,... | component eIF3b of eIF3 mRNA-to-PIC binding complex | 0.12 | OrthoFinder output from all 47 species | |
| Len_g19522 | EIF3B-2, ATEIF3B-2, EIF3B | component *(eIF3b) of eIF3 mRNA-to-PIC binding complex &... | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g06169 | EIF3B-2, ATEIF3B-2, EIF3B | component *(eIF3b) of eIF3 mRNA-to-PIC binding complex &... | 0.02 | OrthoFinder output from all 47 species | |
| MA_86963g0010 | EIF3B-2, ATEIF3B-2, EIF3B | Eukaryotic translation initiation factor 3 subunit B... | 0.06 | OrthoFinder output from all 47 species | |
| MA_86963g0020 | EIF3B-2, ATEIF3B-2, EIF3B | Eukaryotic translation initiation factor 3 subunit B... | 0.05 | OrthoFinder output from all 47 species | |
| MA_950659g0010 | No alias | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
| Mp8g14030.1 | EIF3B-2, ATEIF3B-2, EIF3B | component eIF3b of eIF3 mRNA-to-PIC binding complex | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g07087 | EIF3B-2, ATEIF3B-2, EIF3B | component *(eIF3b) of eIF3 mRNA-to-PIC binding complex &... | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g01028 | EIF3B-2, ATEIF3B-2, EIF3B | component *(eIF3b) of eIF3 mRNA-to-PIC binding complex &... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g10595 | No alias | component *(eIF3b) of eIF3 mRNA-to-PIC binding complex &... | 0.07 | OrthoFinder output from all 47 species | |
| Smo446105 | EIF3B-2, ATEIF3B-2, EIF3B | Protein biosynthesis.translation... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e002405_P001 | ATTIF3B1,... | component eIF3b of eIF3 mRNA-to-PIC binding complex | 0.12 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0003743 | translation initiation factor activity | IEP | HCCA |
| MF | GO:0003746 | translation elongation factor activity | IEP | HCCA |
| MF | GO:0004176 | ATP-dependent peptidase activity | IEP | HCCA |
| MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | HCCA |
| MF | GO:0005047 | signal recognition particle binding | IEP | HCCA |
| MF | GO:0005048 | signal sequence binding | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| CC | GO:0005786 | signal recognition particle, endoplasmic reticulum targeting | IEP | HCCA |
| BP | GO:0006414 | translational elongation | IEP | HCCA |
| BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | HCCA |
| BP | GO:0006605 | protein targeting | IEP | HCCA |
| BP | GO:0006612 | protein targeting to membrane | IEP | HCCA |
| BP | GO:0006613 | cotranslational protein targeting to membrane | IEP | HCCA |
| BP | GO:0006614 | SRP-dependent cotranslational protein targeting to membrane | IEP | HCCA |
| MF | GO:0008135 | translation factor activity, RNA binding | IEP | HCCA |
| MF | GO:0008312 | 7S RNA binding | IEP | HCCA |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
| MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| MF | GO:0030942 | endoplasmic reticulum signal peptide binding | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| MF | GO:0033218 | amide binding | IEP | HCCA |
| BP | GO:0033365 | protein localization to organelle | IEP | HCCA |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| BP | GO:0042254 | ribosome biogenesis | IEP | HCCA |
| MF | GO:0042277 | peptide binding | IEP | HCCA |
| MF | GO:0043021 | ribonucleoprotein complex binding | IEP | HCCA |
| BP | GO:0043038 | amino acid activation | IEP | HCCA |
| BP | GO:0043039 | tRNA aminoacylation | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| BP | GO:0044085 | cellular component biogenesis | IEP | HCCA |
| MF | GO:0044877 | protein-containing complex binding | IEP | HCCA |
| BP | GO:0045047 | protein targeting to ER | IEP | HCCA |
| MF | GO:0045182 | translation regulator activity | IEP | HCCA |
| CC | GO:0048500 | signal recognition particle | IEP | HCCA |
| BP | GO:0051668 | localization within membrane | IEP | HCCA |
| BP | GO:0070972 | protein localization to endoplasmic reticulum | IEP | HCCA |
| BP | GO:0072594 | establishment of protein localization to organelle | IEP | HCCA |
| BP | GO:0072599 | establishment of protein localization to endoplasmic reticulum | IEP | HCCA |
| BP | GO:0072657 | protein localization to membrane | IEP | HCCA |
| MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | HCCA |
| BP | GO:0090150 | establishment of protein localization to membrane | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | HCCA |
| No external refs found! |
