Solyc01g090740.3.1 (Solyc01g090740)


Aliases : Solyc01g090740

Description : no hits & (original description: none)


Gene families : OG0000724 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000724_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g090740.3.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00131p00038170 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
Als_g04765 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g20240 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene25158.t1 Aspi01Gene25158 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene32823.t1 Aspi01Gene32823 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene33023.t1 Aspi01Gene33023 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g61839 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g04415 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_21250 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Gb_22890 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Gb_33530 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_33534 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_40183 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os02g44090.1 LOC_Os02g44090 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os04g37700.1 LOC_Os04g37700 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Len_g01130 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_122248g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_28896g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_36049g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_958501g0010 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Mp1g22530.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g24255 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g15447 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g18470 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g55360 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g16436 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g24546 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g26578 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g32380 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006273 No alias not classified & original description: CDS=1-1368 0.03 OrthoFinder output from all 47 species
Sam_g21415 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo403989 No alias No description available 0.03 OrthoFinder output from all 47 species
Solyc04g076010.3.1 Solyc04g076010 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e000648_P001 Zm00001e000648 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Zm00001e014885_P001 Zm00001e014885 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e023166_P001 Zm00001e023166 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!