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  5. Solyc01g094030.3.1

Solyc01g094030.3.1 (NTMC2TYPE4, NTMC2T4,...)


Aliases : NTMC2TYPE4, NTMC2T4, Solyc01g094030

Description : Synaptotagmin-4 OS=Arabidopsis thaliana (sp|a0jjx5|syt4_arath : 298.0)


Gene families : OG0000213 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000213_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Solyc01g094030.3.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00267880 NTMC2TYPE4,... Synaptotagmin-4 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Als_g59284 SYT5, NTMC2T2.1,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g07889 NTMC2TYPE4, NTMC2T4 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g08587 NTMC2T1.2, SYTB,... membrane tethering protein (SYT1) of... 0.02 OrthoFinder output from all 47 species
Cba_g02633 NTMC2T1.2, SYTB,... membrane tethering protein (SYT1) of... 0.03 OrthoFinder output from all 47 species
Dac_g23047 SYT5, NTMC2T2.1,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g10545 NTMC2T1.2, SYTB,... membrane tethering protein (SYT1) of... 0.03 OrthoFinder output from all 47 species
Gb_20864 NTMC2T1.2, SYTB,... endoplasmic reticulum-plasma membrane tethering protein... 0.03 OrthoFinder output from all 47 species
LOC_Os02g25060.1 NTMC2T1.2, SYTB,... endoplasmic reticulum-plasma membrane tethering protein... 0.04 OrthoFinder output from all 47 species
LOC_Os08g20544.1 SYT5, NTMC2T2.1,... Synaptotagmin-5 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Len_g07405 NTMC2T1.2, SYTB,... membrane tethering protein (SYT1) of... 0.03 OrthoFinder output from all 47 species
Mp6g02520.1 SYT5, NTMC2T2.1,... Synaptotagmin-5 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Nbi_g01232 NTMC2TYPE4, NTMC2T4 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g50229 NTMC2T1.2, SYTB,... membrane tethering protein (SYT1) of... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
InterPro domains Description Start Stop
IPR000008 C2_dom 262 358
IPR039010 Synaptotagmin_SMP 68 248
No external refs found!