1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc01g094890.4.1

Solyc01g094890.4.1 (ATFRO2, FRO2, FRD1,...)


Aliases : ATFRO2, FRO2, FRD1, Solyc01g094890

Description : iron uptake Fe(III)-chelate reductase. metal ion-chelate reductase (FRO)


Gene families : OG0000835 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000835_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g094890.4.1
Cluster HCCA: Cluster_65

Target Alias Description ECC score Gene Family Method Actions
AT5G50160 FRO8, ATFRO8 ferric reduction oxidase 8 0.03 OrthoFinder output from all 47 species
Adi_g007195 FRO7, ATFRO7 metal ion-chelate reductase *(FRO) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g04681 ATFRO6, FRO6 metal ion-chelate reductase *(FRO) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene42991.t1 ATFRO6, FRO6,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0011.g012516 ATFRO6, FRO6 metal ion-chelate reductase *(FRO) & original... 0.03 OrthoFinder output from all 47 species
Ceric.11G045300.1 ATFRO6, FRO6,... metal ion-chelate reductase *(FRO) & original... 0.03 OrthoFinder output from all 47 species
Ceric.26G032700.1 ATFRO6, FRO6,... metal ion-chelate reductase *(FRO) & original... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001532.3 ATFRO2, FRO2, FRD1 No description available 0.03 OrthoFinder output from all 47 species
Gb_17654 ATFRO1, FRO1 iron uptake Fe(III)-chelate reductase. metal ion-chelate... 0.03 OrthoFinder output from all 47 species
Len_g12157 ATFRO6, FRO6 metal ion-chelate reductase *(FRO) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g25532 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_11106g0010 FRO7, ATFRO7 Ferric reduction oxidase 7, chloroplastic OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
MA_171914g0020 ATFRO6, FRO6 iron uptake Fe(III)-chelate reductase. metal ion-chelate... 0.04 OrthoFinder output from all 47 species
Mp1g25890.1 FRO7, ATFRO7 iron uptake Fe(III)-chelate reductase. metal ion-chelate... 0.02 OrthoFinder output from all 47 species
Pir_g31230 ATFRO2, FRO2, FRD1 metal ion-chelate reductase *(FRO) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g08273 ATFRO6, FRO6 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g46636 ATFRO6, FRO6 metal ion-chelate reductase *(FRO) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g59182 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0138.g022542 FRO7, ATFRO7 metal ion-chelate reductase *(FRO) & original... 0.03 OrthoFinder output from all 47 species
Smo110167 FRO4, ATFRO4 Nutrient uptake.copper uptake.reduction-based uptake.FRO... 0.04 OrthoFinder output from all 47 species
Smo145556 ATFRO2, FRO2, FRD1 Nutrient uptake.copper uptake.reduction-based uptake.FRO... 0.03 OrthoFinder output from all 47 species
Smo416972 ATFRO2, FRO2, FRD1 Ferric reduction oxidase 2 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Smo440376 ATFRO2, FRO2, FRD1 Nutrient uptake.copper uptake.reduction-based uptake.FRO... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR013121 Fe_red_NAD-bd_6 459 722
IPR013130 Fe3_Rdtase_TM_dom 202 320
IPR013112 FAD-bd_8 354 453
No external refs found!