Aliases : AGP16, ATAGP16, Solyc01g095515
Description : no hits & (original description: none)
Gene families : OG0003275 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003275_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Solyc01g095515.1.1 | |
| Cluster | HCCA: Cluster_226 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT5G24105 | AGP41 | arabinogalactan protein 41 | 0.07 | OrthoFinder output from all 47 species | |
| Aspi01Gene62368.t1 | AtAGP20, AGP20,... | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Ceric.02G026000.1 | Ceric.02G026000 | not classified & original description: pacid=50586127... | 0.01 | OrthoFinder output from all 47 species | |
| GSVIVT01015262001 | No alias | No description available | 0.02 | OrthoFinder output from all 47 species | |
| Gb_00507 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g46850.1 | LOC_Os01g46850 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Len_g59793 | AtAGP20, AGP20 | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0069.g016488 | AGP16, ATAGP16 | not classified & original description: CDS=83-316 | 0.01 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0806.g027738 | AGP16, ATAGP16 | not classified & original description: CDS=83-316 | 0.01 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s3300.g028712 | AGP16, ATAGP16 | not classified & original description: CDS=83-316 | 0.01 | OrthoFinder output from all 47 species | |
| Solyc10g011730.3.1 | AtAGP20, AGP20,... | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Solyc12g007045.1.1 | AGP41, Solyc12g007045 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g03352 | AGP41 | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Tin_g01342 | AGP16, ATAGP16 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0009719 | response to endogenous stimulus | IEP | HCCA |
| BP | GO:0009725 | response to hormone | IEP | HCCA |
| BP | GO:0009733 | response to auxin | IEP | HCCA |
| BP | GO:0010033 | response to organic substance | IEP | HCCA |
| BP | GO:0042221 | response to chemical | IEP | HCCA |
| BP | GO:0050896 | response to stimulus | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR009424 | AGP16/20/22/41 | 25 | 57 |
| No external refs found! |
