Aliases : Solyc01g096920
Description : NUFIP snoRNP rRNA methylation complex assembly factor
Gene families : OG0003682 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003682_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Solyc01g096920.3.1 | |
| Cluster | HCCA: Cluster_19 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT5G18440 | No alias | CONTAINS InterPro DOMAIN/s: Nuclear fragile X mental... | 0.06 | OrthoFinder output from all 47 species | |
| Adi_g082531 | No alias | snoRNP rRNA methylation complex assembly factor *(NUFIP)... | 0.02 | OrthoFinder output from all 47 species | |
| Als_g63113 | No alias | snoRNP rRNA methylation complex assembly factor *(NUFIP)... | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g11786 | No alias | snoRNP rRNA methylation complex assembly factor *(NUFIP)... | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g08132 | No alias | snoRNP rRNA methylation complex assembly factor *(NUFIP)... | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g50146 | No alias | snoRNP rRNA methylation complex assembly factor *(NUFIP)... | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g24829 | No alias | snoRNP rRNA methylation complex assembly factor *(NUFIP)... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01027215001 | No alias | RNA processing.RNA modification.rRNA/tRNA... | 0.1 | OrthoFinder output from all 47 species | |
| Gb_31525 | No alias | NUFIP snoRNP rRNA methylation complex assembly factor | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os01g59860.1 | LOC_Os01g59860 | NUFIP snoRNP rRNA methylation complex assembly factor | 0.08 | OrthoFinder output from all 47 species | |
| MA_10431482g0010 | No alias | NUFIP snoRNP rRNA methylation complex assembly factor | 0.07 | OrthoFinder output from all 47 species | |
| MA_30455g0010 | No alias | NUFIP snoRNP rRNA methylation complex assembly factor | 0.05 | OrthoFinder output from all 47 species | |
| Mp2g25420.1 | No alias | NUFIP snoRNP rRNA methylation complex assembly factor | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g07400 | No alias | snoRNP rRNA methylation complex assembly factor *(NUFIP)... | 0.03 | OrthoFinder output from all 47 species | |
| Pp3c27_4140V3.1 | Pp3c27_4140 | No annotation | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g41951 | No alias | snoRNP rRNA methylation complex assembly factor *(NUFIP)... | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g16776 | No alias | snoRNP rRNA methylation complex assembly factor *(NUFIP)... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g15180 | No alias | snoRNP rRNA methylation complex assembly factor *(NUFIP)... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e019484_P003 | Zm00001e019484 | NUFIP snoRNP rRNA methylation complex assembly factor | 0.1 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| CC | GO:0005634 | nucleus | IEP | HCCA |
| BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
| MF | GO:0008238 | exopeptidase activity | IEP | HCCA |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| BP | GO:0018130 | heterocycle biosynthetic process | IEP | HCCA |
| BP | GO:0019438 | aromatic compound biosynthetic process | IEP | HCCA |
| BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
| MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | HCCA |
| BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| BP | GO:0042274 | ribosomal small subunit biogenesis | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| CC | GO:0043227 | membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | HCCA |
| BP | GO:0044085 | cellular component biogenesis | IEP | HCCA |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
| MF | GO:0070008 | serine-type exopeptidase activity | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
| MF | GO:0097747 | RNA polymerase activity | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR019496 | NUFIP1_cons_dom | 428 | 455 |
| No external refs found! |
