Solyc01g097460.3.1 (Solyc01g097460)

Aliases : Solyc01g097460

Description : phosphopentose isomerase. ribose 5-phosphate isomerase

Gene families : OG0003243 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003243_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc01g097460.3.1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00002p00271180	evm_27.TU.AmTr_v1...	Carbohydrate metabolism.oxidative pentose phosphate...	0.08	OrthoFinder output from all 47 species
AT3G04790	No alias	Ribose 5-phosphate isomerase, type A protein	0.12	OrthoFinder output from all 47 species
Aev_g04500	No alias	EC_5.3 intramolecular oxidoreductase & original description: none	0.02	OrthoFinder output from all 47 species
Als_g48216	No alias	EC_5.3 intramolecular oxidoreductase & original description: none	0.09	OrthoFinder output from all 47 species
Aob_g02930	No alias	EC_5.3 intramolecular oxidoreductase & original description: none	0.04	OrthoFinder output from all 47 species
Aop_g12002	No alias	EC_5.3 intramolecular oxidoreductase & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.16G077200.1	Ceric.16G077200	EC_5.3 intramolecular oxidoreductase & original...	0.1	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000551.5	No alias	Carbohydrate metabolism.oxidative pentose phosphate...	0.05	OrthoFinder output from all 47 species
Cre03.g187450	No alias	Carbohydrate metabolism.oxidative pentose phosphate...	0.04	OrthoFinder output from all 47 species
Dac_g15950	No alias	EC_5.3 intramolecular oxidoreductase & original description: none	0.05	OrthoFinder output from all 47 species
Dac_g34490	No alias	EC_5.3 intramolecular oxidoreductase & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g44231	No alias	EC_5.3 intramolecular oxidoreductase & original description: none	0.02	OrthoFinder output from all 47 species
Dde_g14329	No alias	EC_5.3 intramolecular oxidoreductase & original description: none	0.06	OrthoFinder output from all 47 species
Ehy_g05556	No alias	EC_5.3 intramolecular oxidoreductase & original description: none	0.05	OrthoFinder output from all 47 species
LOC_Os07g08030.1	LOC_Os07g08030	phosphopentose isomerase. ribose 5-phosphate isomerase	0.11	OrthoFinder output from all 47 species
Len_g30006	No alias	EC_5.3 intramolecular oxidoreductase & original description: none	0.1	OrthoFinder output from all 47 species
Mp8g18400.1	No alias	phosphopentose isomerase. ribose 5-phosphate isomerase	0.13	OrthoFinder output from all 47 species
Msp_g29121	No alias	EC_5.3 intramolecular oxidoreductase & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g03389	No alias	EC_5.3 intramolecular oxidoreductase & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g10042	No alias	EC_5.3 intramolecular oxidoreductase & original description: none	0.05	OrthoFinder output from all 47 species
Ore_g10043	No alias	EC_5.3 intramolecular oxidoreductase & original description: none	0.04	OrthoFinder output from all 47 species
Pp3c5_21490V3.1	Pp3c5_21490	Ribose 5-phosphate isomerase, type A protein	0.03	OrthoFinder output from all 47 species
Ppi_g46049	No alias	EC_5.3 intramolecular oxidoreductase & original description: none	0.04	OrthoFinder output from all 47 species
Sacu_v1.1_s0070.g016705	No alias	EC_5.3 intramolecular oxidoreductase & original...	0.03	OrthoFinder output from all 47 species
Sam_g16880	No alias	EC_5.3 intramolecular oxidoreductase & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g30055	No alias	EC_5.3 intramolecular oxidoreductase & original description: none	0.04	OrthoFinder output from all 47 species
Smo74055	No alias	Carbohydrate metabolism.oxidative pentose phosphate...	0.04	OrthoFinder output from all 47 species
Spa_g22712	No alias	EC_5.3 intramolecular oxidoreductase & original description: none	0.06	OrthoFinder output from all 47 species
Zm00001e032919_P001	Zm00001e032919	phosphopentose isomerase. ribose 5-phosphate isomerase	0.07	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004751	ribose-5-phosphate isomerase activity	IEA	Interproscan
BP	GO:0006091	generation of precursor metabolites and energy	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009052	pentose-phosphate shunt, non-oxidative branch	IEA	Interproscan
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016853	isomerase activity	None	Extended
MF	GO:0016860	intramolecular oxidoreductase activity	None	Extended
MF	GO:0016861	intramolecular oxidoreductase activity, interconverting aldoses and ketoses	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004332	fructose-bisphosphate aldolase activity	IEP	HCCA
MF	GO:0004356	glutamate-ammonia ligase activity	IEP	HCCA
BP	GO:0006082	organic acid metabolic process	IEP	HCCA
BP	GO:0006090	pyruvate metabolic process	IEP	HCCA
BP	GO:0006096	glycolytic process	IEP	HCCA
BP	GO:0006163	purine nucleotide metabolic process	IEP	HCCA
BP	GO:0006165	nucleoside diphosphate phosphorylation	IEP	HCCA
BP	GO:0006520	amino acid metabolic process	IEP	HCCA
BP	GO:0006541	glutamine metabolic process	IEP	HCCA
BP	GO:0006542	glutamine biosynthetic process	IEP	HCCA
BP	GO:0006757	ATP generation from ADP	IEP	HCCA
BP	GO:0008652	amino acid biosynthetic process	IEP	HCCA
BP	GO:0009064	glutamine family amino acid metabolic process	IEP	HCCA
BP	GO:0009084	glutamine family amino acid biosynthetic process	IEP	HCCA
BP	GO:0009117	nucleotide metabolic process	IEP	HCCA
BP	GO:0009132	nucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009135	purine nucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009141	nucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009144	purine nucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009150	purine ribonucleotide metabolic process	IEP	HCCA
BP	GO:0009179	purine ribonucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009185	ribonucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009199	ribonucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009205	purine ribonucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009259	ribonucleotide metabolic process	IEP	HCCA
BP	GO:0016052	carbohydrate catabolic process	IEP	HCCA
BP	GO:0016053	organic acid biosynthetic process	IEP	HCCA
MF	GO:0016211	ammonia ligase activity	IEP	HCCA
MF	GO:0016491	oxidoreductase activity	IEP	HCCA
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	IEP	HCCA
MF	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	IEP	HCCA
MF	GO:0016620	oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	IEP	HCCA
MF	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups	IEP	HCCA
MF	GO:0016830	carbon-carbon lyase activity	IEP	HCCA
MF	GO:0016832	aldehyde-lyase activity	IEP	HCCA
MF	GO:0016874	ligase activity	IEP	HCCA
MF	GO:0016879	ligase activity, forming carbon-nitrogen bonds	IEP	HCCA
MF	GO:0016880	acid-ammonia (or amide) ligase activity	IEP	HCCA
MF	GO:0016903	oxidoreductase activity, acting on the aldehyde or oxo group of donors	IEP	HCCA
BP	GO:0019693	ribose phosphate metabolic process	IEP	HCCA
BP	GO:0019725	cellular homeostasis	IEP	HCCA
BP	GO:0019752	carboxylic acid metabolic process	IEP	HCCA
BP	GO:0032787	monocarboxylic acid metabolic process	IEP	HCCA
BP	GO:0042592	homeostatic process	IEP	HCCA
BP	GO:0043436	oxoacid metabolic process	IEP	HCCA
BP	GO:0044249	cellular biosynthetic process	IEP	HCCA
BP	GO:0044281	small molecule metabolic process	IEP	HCCA
BP	GO:0044283	small molecule biosynthetic process	IEP	HCCA
BP	GO:0045454	cell redox homeostasis	IEP	HCCA
BP	GO:0046031	ADP metabolic process	IEP	HCCA
BP	GO:0046034	ATP metabolic process	IEP	HCCA
BP	GO:0046394	carboxylic acid biosynthetic process	IEP	HCCA
BP	GO:0046939	nucleotide phosphorylation	IEP	HCCA
MF	GO:0051536	iron-sulfur cluster binding	IEP	HCCA
MF	GO:0051537	2 iron, 2 sulfur cluster binding	IEP	HCCA
MF	GO:0051540	metal cluster binding	IEP	HCCA
BP	GO:0055114	obsolete oxidation-reduction process	IEP	HCCA
BP	GO:0072521	purine-containing compound metabolic process	IEP	HCCA
BP	GO:1901566	organonitrogen compound biosynthetic process	IEP	HCCA
BP	GO:1901576	organic substance biosynthetic process	IEP	HCCA
BP	GO:1901605	alpha-amino acid metabolic process	IEP	HCCA
BP	GO:1901607	alpha-amino acid biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR004788	Ribose5P_isomerase_type_A	111	287

External Links

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Solyc01g097460.3.1 (Solyc01g097460)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation