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  5. Solyc01g097910.2.1

Solyc01g097910.2.1 (Solyc01g097910)


Aliases : Solyc01g097910

Description : RBD1 protein involved in PS-II assembly


Gene families : OG0005565 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005565_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g097910.2.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00123650 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.photosystem... 0.02 OrthoFinder output from all 47 species
AT1G54500 No alias Rubredoxin-like superfamily protein 0.1 OrthoFinder output from all 47 species
Aev_g02854 No alias protein involved in PS-II assembly *(RBD1) & original... 0.05 OrthoFinder output from all 47 species
Ala_g25461 No alias protein involved in PS-II assembly *(RBD1) & original... 0.03 OrthoFinder output from all 47 species
Als_g13490 No alias protein involved in PS-II assembly *(RBD1) & original... 0.05 OrthoFinder output from all 47 species
Aspi01Gene26833.t1 Aspi01Gene26833 protein involved in PS-II assembly *(RBD1) & original... 0.04 OrthoFinder output from all 47 species
Azfi_s0017.g014438 No alias protein involved in PS-II assembly *(RBD1) & original... 0.03 OrthoFinder output from all 47 species
Ceric.13G098300.1 Ceric.13G098300 protein involved in PS-II assembly *(RBD1) & original... 0.03 OrthoFinder output from all 47 species
Dac_g14889 No alias protein involved in PS-II assembly *(RBD1) & original... 0.03 OrthoFinder output from all 47 species
Ehy_g03089 No alias protein involved in PS-II assembly *(RBD1) & original... 0.04 OrthoFinder output from all 47 species
Gb_24370 No alias RBD1 protein involved in PS-II assembly 0.05 OrthoFinder output from all 47 species
LOC_Os08g23410.1 LOC_Os08g23410 RBD1 protein involved in PS-II assembly 0.06 OrthoFinder output from all 47 species
Len_g02652 No alias protein involved in PS-II assembly *(RBD1) & original... 0.02 OrthoFinder output from all 47 species
MA_158671g0010 No alias RBD1 protein involved in PS-II assembly 0.04 OrthoFinder output from all 47 species
Mp5g13990.1 No alias RBD1 protein involved in PS-II assembly 0.02 OrthoFinder output from all 47 species
Nbi_g13645 No alias protein involved in PS-II assembly *(RBD1) & original... 0.03 OrthoFinder output from all 47 species
Pnu_g21356 No alias protein involved in PS-II assembly *(RBD1) & original... 0.04 OrthoFinder output from all 47 species
Pp3c1_22450V3.1 Pp3c1_22450 Rubredoxin-like superfamily protein 0.02 OrthoFinder output from all 47 species
Spa_g09611 No alias protein involved in PS-II assembly *(RBD1) & original... 0.05 OrthoFinder output from all 47 species
Spa_g22961 No alias protein involved in PS-II assembly *(RBD1) & original... 0.04 OrthoFinder output from all 47 species
Zm00001e006086_P001 Zm00001e006086 RBD1 protein involved in PS-II assembly 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR024935 Rubredoxin_dom 111 156
No external refs found!