Aliases : AtATG18a, Solyc01g099400
Description : component ATG18 of autophagosome ATG9-2-18 membrane shuttling complex
Gene families : OG0000802 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000802_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Solyc01g099400.4.1 | |
| Cluster | HCCA: Cluster_34 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Ala_g01676 | AtATG18a | component *(ATG18) of autophagosome ATG9-2-18 membrane... | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g06158 | AtATG18a | component *(ATG18) of autophagosome ATG9-2-18 membrane... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.10G051600.1 | ATG18C,... | component *(ATG18) of autophagosome ATG9-2-18 membrane... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.28G041900.1 | ATG18D,... | component *(ATG18) of autophagosome ATG9-2-18 membrane... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.37G046000.1 | AtATG18a, Ceric.37G046000 | component *(ATG18) of autophagosome ATG9-2-18 membrane... | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g04755 | AtATG18a | component *(ATG18) of autophagosome ATG9-2-18 membrane... | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g15254 | AtATG18a | component *(ATG18) of autophagosome ATG9-2-18 membrane... | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g02008 | AtATG18a | component *(ATG18) of autophagosome ATG9-2-18 membrane... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g04557 | AtATG18a | component *(ATG18) of autophagosome ATG9-2-18 membrane... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g09790 | AtATG18a | component *(ATG18) of autophagosome ATG9-2-18 membrane... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004518 | nuclease activity | IEP | HCCA |
| MF | GO:0004527 | exonuclease activity | IEP | HCCA |
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | HCCA |
| MF | GO:0008374 | O-acyltransferase activity | IEP | HCCA |
| MF | GO:0008408 | 3'-5' exonuclease activity | IEP | HCCA |
| MF | GO:0015035 | protein-disulfide reductase activity | IEP | HCCA |
| MF | GO:0015036 | disulfide oxidoreductase activity | IEP | HCCA |
| MF | GO:0016667 | oxidoreductase activity, acting on a sulfur group of donors | IEP | HCCA |
| MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001680 | WD40_repeat | 183 | 211 |
| No external refs found! |
