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  5. Solyc01g099990.3.1

Solyc01g099990.3.1 (PP2-B15, AtPP2-B15,...)


Aliases : PP2-B15, AtPP2-B15, Solyc01g099990

Description : F-box protein PP2-B15 OS=Arabidopsis thaliana (sp|o80494|p2b15_arath : 231.0)


Gene families : OG0000279 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000279_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g099990.3.1
Cluster HCCA: Cluster_113

Target Alias Description ECC score Gene Family Method Actions
AT1G56240 PP2-B13, AtPP2-B13 phloem protein 2-B13 0.02 OrthoFinder output from all 47 species
AT1G56250 PP2-B14, AtPP2-B14 phloem protein 2-B14 0.04 OrthoFinder output from all 47 species
Als_g15955 AtPP2-B8, PP2-B8 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g36351 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0322.g064518 No alias not classified & original description: CDS=191-1105 0.03 OrthoFinder output from all 47 species
Azfi_s0322.g064522 No alias not classified & original description: CDS=100-843 0.03 OrthoFinder output from all 47 species
Azfi_s2399.g111181 No alias not classified & original description: CDS=192-1106 0.04 OrthoFinder output from all 47 species
Cba_g09552 MEE66 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.16G068500.1 AtPP2-B1,... not classified & original description: pacid=50588978... 0.03 OrthoFinder output from all 47 species
Ceric.16G068900.1 AtPP2-B1,... not classified & original description: pacid=50589027... 0.03 OrthoFinder output from all 47 species
Dac_g17005 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g14188 AtPP2-B7, PP2-B7 not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01003904001 AtPP2-B10, PP2-B10 F-box protein At2g02240 OS=Arabidopsis thaliana 0.07 OrthoFinder output from all 47 species
LOC_Os02g56820.1 MEE66, LOC_Os02g56820 F-box protein At2g02240 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os04g21130.1 ATPP2-B11,... Putative F-box protein PP2-B12 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os08g05480.1 AtPP2-B1,... Putative F-box protein PP2-B2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Lfl_g34827 ATPP2-A5, PP2-A5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10426431g0010 AtPP2-B6, PP2-B6 F-box protein PP2-B15 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_227118g0010 No alias F-box protein PP2-B15 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Msp_g22955 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc04g056680.2.1 AtPP2-B10,... F-box protein PP2-B10 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc05g053620.3.1 AtPP2-B10,... Putative F-box protein PP2-B12 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc12g044930.3.1 AtPP2-B10,... F-box protein At2g02240 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
InterPro domains Description Start Stop
IPR001810 F-box_dom 7 52
IPR025886 PP2-like 101 286
No external refs found!