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  5. Solyc01g102930.1.1

Solyc01g102930.1.1 (Solyc01g102930)


Aliases : Solyc01g102930

Description : no description available(sp|f4jt78|rpp2a_arath : 145.0)


Gene families : OG0000030 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g102930.1.1
Cluster HCCA: Cluster_42

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00056p00146250 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00109p00126580 evm_27.TU.AmTr_v1... External stimuli response.biotic stress.pathogen... 0.01 OrthoFinder output from all 47 species
AT1G61105 No alias Toll-Interleukin-Resistance (TIR) domain family protein 0.01 OrthoFinder output from all 47 species
AT1G63730 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 OrthoFinder output from all 47 species
AT5G40910 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.02 OrthoFinder output from all 47 species
Adi_g066110 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g30097 No alias effector receptor *(NLR) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34778.t1 Aspi01Gene34778 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g72785 LAZ5 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.33G004100.1 Ceric.33G004100 not classified & original description: pacid=50606634... 0.01 OrthoFinder output from all 47 species
GSVIVT01036408001 No alias External stimuli response.biotic stress.pathogen... 0.01 OrthoFinder output from all 47 species
Gb_14266 No alias Disease resistance protein TAO1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Gb_16090 No alias effector receptor (NLR) 0.01 OrthoFinder output from all 47 species
Gb_24680 No alias effector receptor (NLR) 0.02 OrthoFinder output from all 47 species
Gb_26215 No alias TMV resistance protein N OS=Nicotiana glutinosa... 0.02 OrthoFinder output from all 47 species
Gb_26262 No alias effector receptor (NLR) 0.02 OrthoFinder output from all 47 species
Gb_33284 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_10236907g0010 No alias effector receptor (NLR) 0.01 OrthoFinder output from all 47 species
MA_10431676g0010 No alias effector receptor (NLR) 0.02 OrthoFinder output from all 47 species
MA_10432315g0010 No alias effector receptor (NLR) 0.02 OrthoFinder output from all 47 species
MA_211051g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_500099g0010 SNC1, BAL TMV resistance protein N OS=Nicotiana glutinosa... 0.01 OrthoFinder output from all 47 species
MA_516333g0010 No alias effector receptor (NLR) 0.02 OrthoFinder output from all 47 species
MA_952149g0020 No alias Disease resistance-like protein DSC1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Pir_g30935 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g48708 No alias effector receptor *(NLR) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g52108 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c20_22230V3.1 Pp3c20_22230 Disease resistance protein (TIR-NBS-LRR class) family 0.01 OrthoFinder output from all 47 species
Solyc07g052770.2.1 Solyc07g052770 effector receptor (NLR) 0.01 OrthoFinder output from all 47 species
Solyc11g011350.3.1 Solyc11g011350 effector receptor (NLR) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003993 acid phosphatase activity IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004525 ribonuclease III activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 292 313
No external refs found!