Solyc01g104700.4.1 (RAN2, Solyc01g104700)

Aliases : RAN2, Solyc01g104700

Description : Ran GTPase

Gene families : OG0000916 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000916_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc01g104700.4.1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00009p00207870	RAN3, ATRAN3,...	Protein translocation.nucleus.nucleocytoplasmic...	0.03	OrthoFinder output from all 47 species
AT5G20020	RAN2	RAS-related GTP-binding nuclear protein 2	0.04	OrthoFinder output from all 47 species
Als_g13007	RAN3, ATRAN3	GTPase *(Ran) & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g51668	RAN3, ATRAN3	GTPase *(Ran) & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene15514.t1	RAN1, RAN-1,...	GTPase *(Ran) & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene18162.t1	RAN1, RAN-1,...	GTPase *(Ran) & original description: none	0.02	OrthoFinder output from all 47 species
Azfi_s0094.g043417	RAN2	GTPase *(Ran) & original description: CDS=291-938	0.01	OrthoFinder output from all 47 species
Cba_g15320	RAN3, ATRAN3	GTPase *(Ran) & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g31120	RAN1, RAN-1, ATRAN1	GTPase *(Ran) & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.10G019400.1	RAN3, ATRAN3,...	GTPase *(Ran) & original description: pacid=50612012...	0.05	OrthoFinder output from all 47 species
Ceric.35G063800.1	RAN3, ATRAN3,...	GTPase *(Ran) & original description: pacid=50581751...	0.02	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000194.22	RAN2	Protein translocation.nucleus.nucleocytoplasmic...	0.01	OrthoFinder output from all 47 species
Cre03.g191050	RAN1, RAN-1, ATRAN1	Protein translocation.nucleus.nucleocytoplasmic...	0.03	OrthoFinder output from all 47 species
Dac_g31932	RAN3, ATRAN3	GTPase *(Ran) & original description: none	0.02	OrthoFinder output from all 47 species
Dac_g44710	RAN3, ATRAN3	GTPase *(Ran) & original description: none	0.02	OrthoFinder output from all 47 species
Dcu_g28223	RAN2	GTPase *(Ran) & original description: none	0.02	OrthoFinder output from all 47 species
Dde_g03742	RAN3, ATRAN3	GTPase *(Ran) & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01015482001	RAN2	Protein translocation.nucleus.nucleocytoplasmic...	0.02	OrthoFinder output from all 47 species
GSVIVT01017234001	RAN2	Protein translocation.nucleus.nucleocytoplasmic...	0.03	OrthoFinder output from all 47 species
GSVIVT01035804001	RAN2	Protein translocation.nucleus.nucleocytoplasmic...	0.01	OrthoFinder output from all 47 species
GSVIVT01035805001	RAN2	Protein translocation.nucleus.nucleocytoplasmic...	0.01	OrthoFinder output from all 47 species
Gb_30495	RAN3, ATRAN3	Ran GTPase	0.1	OrthoFinder output from all 47 species
Lfl_g22288	RAN3, ATRAN3	GTPase *(Ran) & original description: none	0.03	OrthoFinder output from all 47 species
Mp2g19920.1	RAN2	Ran GTPase	0.08	OrthoFinder output from all 47 species
Nbi_g04585	RAN3, ATRAN3	GTPase *(Ran) & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g19308	No alias	GTPase *(Ran) & original description: none	0.02	OrthoFinder output from all 47 species
Solyc05g023800.3.1	RAN2, Solyc05g023800	Ran GTPase	0.06	OrthoFinder output from all 47 species
Spa_g47199	RAN3, ATRAN3	GTPase *(Ran) & original description: none	0.02	OrthoFinder output from all 47 species
Tin_g01491	RAN2	GTPase *(Ran) & original description: none	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003872	6-phosphofructokinase activity	IEP	HCCA
BP	GO:0005975	carbohydrate metabolic process	IEP	HCCA
BP	GO:0006082	organic acid metabolic process	IEP	HCCA
BP	GO:0006090	pyruvate metabolic process	IEP	HCCA
BP	GO:0006091	generation of precursor metabolites and energy	IEP	HCCA
BP	GO:0006096	glycolytic process	IEP	HCCA
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0006163	purine nucleotide metabolic process	IEP	HCCA
BP	GO:0006165	nucleoside diphosphate phosphorylation	IEP	HCCA
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	HCCA
BP	GO:0006753	nucleoside phosphate metabolic process	IEP	HCCA
BP	GO:0006757	ATP generation from ADP	IEP	HCCA
BP	GO:0006793	phosphorus metabolic process	IEP	HCCA
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	HCCA
MF	GO:0008443	phosphofructokinase activity	IEP	HCCA
BP	GO:0009056	catabolic process	IEP	HCCA
BP	GO:0009117	nucleotide metabolic process	IEP	HCCA
BP	GO:0009132	nucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009135	purine nucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009141	nucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009144	purine nucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009150	purine ribonucleotide metabolic process	IEP	HCCA
BP	GO:0009179	purine ribonucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009185	ribonucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009199	ribonucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009205	purine ribonucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009259	ribonucleotide metabolic process	IEP	HCCA
BP	GO:0016052	carbohydrate catabolic process	IEP	HCCA
MF	GO:0016301	kinase activity	IEP	HCCA
BP	GO:0016310	phosphorylation	IEP	HCCA
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	HCCA
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	HCCA
MF	GO:0019200	carbohydrate kinase activity	IEP	HCCA
BP	GO:0019637	organophosphate metabolic process	IEP	HCCA
BP	GO:0019693	ribose phosphate metabolic process	IEP	HCCA
BP	GO:0019752	carboxylic acid metabolic process	IEP	HCCA
BP	GO:0032787	monocarboxylic acid metabolic process	IEP	HCCA
BP	GO:0034641	cellular nitrogen compound metabolic process	IEP	HCCA
BP	GO:0043436	oxoacid metabolic process	IEP	HCCA
BP	GO:0044281	small molecule metabolic process	IEP	HCCA
BP	GO:0046031	ADP metabolic process	IEP	HCCA
BP	GO:0046034	ATP metabolic process	IEP	HCCA
BP	GO:0046483	heterocycle metabolic process	IEP	HCCA
BP	GO:0046939	nucleotide phosphorylation	IEP	HCCA
BP	GO:0055086	nucleobase-containing small molecule metabolic process	IEP	HCCA
BP	GO:0072521	purine-containing compound metabolic process	IEP	HCCA
BP	GO:1901135	carbohydrate derivative metabolic process	IEP	HCCA
BP	GO:1901360	organic cyclic compound metabolic process	IEP	HCCA
BP	GO:1901575	organic substance catabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001806	Small_GTPase	15	171

External Links

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Solyc01g104700.4.1 (RAN2, Solyc01g104700)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation