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  5. Solyc01g105020.3.1

Solyc01g105020.3.1 (Solyc01g105020)


Aliases : Solyc01g105020

Description : Probable protein phosphatase 2C 71 OS=Oryza sativa subsp. japonica (sp|q339d2|p2c71_orysj : 279.0)


Gene families : OG0000571 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000571_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g105020.3.1
Cluster HCCA: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
AT2G30170 No alias Protein phosphatase 2C family protein 0.04 OrthoFinder output from all 47 species
AT4G33500 No alias Protein phosphatase 2C family protein 0.05 OrthoFinder output from all 47 species
Als_g32280 No alias phosphatase *(PBCP) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g08345 No alias phosphatase *(PBCP) & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene62676.t1 Aspi01Gene62676 phosphatase *(PBCP) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0095.g043630 No alias phosphatase *(PBCP) & original description: CDS=45-986 0.05 OrthoFinder output from all 47 species
Cba_g68354 No alias component *(eL29) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Ceric.1Z173900.1 Ceric.1Z173900 phosphatase *(PBCP) & original description:... 0.06 OrthoFinder output from all 47 species
Dac_g09847 No alias phosphatase *(PBCP) & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g33331 No alias phosphatase *(PBCP) & original description: none 0.09 OrthoFinder output from all 47 species
Dde_g26968 No alias phosphatase *(PBCP) & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g02459 No alias phosphatase *(PBCP) & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g17993 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01024641001 No alias Photosynthesis.photophosphorylation.photosystem... 0.04 OrthoFinder output from all 47 species
GSVIVT01029794001 No alias Probable protein phosphatase 2C BIPP2C1 OS=Oryza sativa... 0.04 OrthoFinder output from all 47 species
Gb_10834 No alias Probable protein phosphatase 2C 26 OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species
LOC_Os01g07090.1 LOC_Os01g07090 photosynthetic acclimation PBCP phosphatase 0.1 OrthoFinder output from all 47 species
LOC_Os03g09220.1 LOC_Os03g09220 Probable protein phosphatase 2C BIPP2C1 OS=Oryza sativa... 0.06 OrthoFinder output from all 47 species
Len_g20278 No alias phosphatase *(PBCP) & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g17211 No alias phosphatase *(PBCP) & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g05138 No alias phosphatase *(PBCP) & original description: none 0.07 OrthoFinder output from all 47 species
Nbi_g05276 No alias phosphatase *(PBCP) & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g04619 No alias phosphatase *(PBCP) & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g24669 No alias phosphatase *(PBCP) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e016822_P004 Zm00001e016822 photosynthetic acclimation PBCP phosphatase 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR001932 PPM-type_phosphatase-like_dom 832 1039
No external refs found!