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  5. Solyc01g106030.4.1

Solyc01g106030.4.1 (TIFY2B, ZML1, GATA24,...)


Aliases : TIFY2B, ZML1, GATA24, Solyc01g106030

Description : transcription factor (GATA)


Gene families : OG0001741 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001741_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g106030.4.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00033p00221090 ZML2, GATA28,... RNA biosynthesis.transcriptional activation.C2C2... 0.02 OrthoFinder output from all 47 species
GSVIVT01009198001 TIFY2B, ZML1, GATA24 RNA biosynthesis.transcriptional activation.C2C2... 0.03 OrthoFinder output from all 47 species
Nbi_g18752 TIFY2B, ZML1, GATA24 transcription factor *(C-GATA) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
MF GO:0043565 sequence-specific DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0033218 amide binding IEP HCCA
MF GO:0120227 acyl-CoA binding IEP HCCA
MF GO:1901567 fatty acid derivative binding IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA
InterPro domains Description Start Stop
IPR000679 Znf_GATA 244 279
IPR010402 CCT_domain 176 218
IPR010399 Tify_dom 112 143
No external refs found!