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  5. Solyc01g107300.4.1

Solyc01g107300.4.1 (Solyc01g107300)


Aliases : Solyc01g107300

Description : clade D phosphatase


Gene families : OG0000288 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000288_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g107300.4.1
Cluster HCCA: Cluster_69

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00023p00195110 evm_27.TU.AmTr_v1... Protein modification.dephosphorylation.serine/threonine... 0.09 OrthoFinder output from all 47 species
AT3G51370 No alias Protein phosphatase 2C family protein 0.01 OrthoFinder output from all 47 species
Adi_g076676 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ala_g13489 No alias clade D phosphatase & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene00330.t1 Aspi01Gene00330 clade D phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g20622 No alias clade D phosphatase & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g28251 No alias clade D phosphatase & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g02229 No alias clade D phosphatase & original description: none 0.01 OrthoFinder output from all 47 species
GSVIVT01037875001 No alias Protein modification.dephosphorylation.serine/threonine... 0.02 OrthoFinder output from all 47 species
LOC_Os06g50380.2 LOC_Os06g50380 clade D phosphatase 0.02 OrthoFinder output from all 47 species
LOC_Os10g39780.2 LOC_Os10g39780 clade D phosphatase 0.03 OrthoFinder output from all 47 species
Len_g01222 No alias clade D phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Len_g31673 No alias clade D phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Len_g47441 No alias clade D phosphatase & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g02103 No alias clade D phosphatase & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g01621 No alias clade D phosphatase & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g37411 No alias not classified & original description: none 0.12 OrthoFinder output from all 47 species
Ppi_g02837 No alias clade D phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e000306_P001 Zm00001e000306 clade D phosphatase 0.04 OrthoFinder output from all 47 species
Zm00001e000307_P001 Zm00001e000307 clade D phosphatase 0.03 OrthoFinder output from all 47 species
Zm00001e013293_P001 Zm00001e013293 clade D phosphatase 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006810 transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
InterPro domains Description Start Stop
IPR001932 PPM-type_phosphatase-like_dom 56 211
No external refs found!