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  5. Solyc01g109660.2.1

Solyc01g109660.2.1 (CCR2, ATGRP7, GRP7,...)


Aliases : CCR2, ATGRP7, GRP7, GR-RBP7, Solyc01g109660

Description : RNA chaperone (RZ1|GR-RBP)


Gene families : OG0000073 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000073_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g109660.2.1

Target Alias Description ECC score Gene Family Method Actions
AT4G13860 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.02 OrthoFinder output from all 47 species
Adi_g006714 GR-RBP3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g014441 CCR2, ATGRP7,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g022268 GR-RBP3 RNA editing factor *(ORRM3) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g043929 CCR2, ATGRP7,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g068967 GRP2, ATGRP2, GR-RBP2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g082209 GR-RBP5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g108265 No alias RNA chaperone *(RZ1) & original description: none 0.01 OrthoFinder output from all 47 species
Aob_g12386 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Aob_g32051 GR-RBP3 RNA editing factor *(ORRM3) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene23259.t1 GR-RBP4, GRP4,... RNA editing factor *(ORRM3) & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene52246.t1 Aspi01Gene52246 RNA chaperone *(RZ1) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene62878.t1 GRP2, ATGRP2,... not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene71155.t1 Aspi01Gene71155 RNA chaperone *(RZ1) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s1992.g108577 GR-RBP3 not classified & original description: CDS=15-479 0.02 OrthoFinder output from all 47 species
Ehy_g26781 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os12g43600.1 CCR2, ATGRP7,... RNA chaperone (RZ1|GR-RBP) 0.02 OrthoFinder output from all 47 species
Len_g06168 CCR2, ATGRP7,... not classified & original description: none 0.01 OrthoFinder output from all 47 species
Lfl_g02744 CCR2, ATGRP7,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g25253 GR-RBP3 RNA editing factor *(ORRM3) & original description: none 0.1 OrthoFinder output from all 47 species
Nbi_g02220 CCR2, ATGRP7,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g29739 GR-RBP3 RNA editing factor *(ORRM3) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g31715 GR-RBP4, GRP4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g32725 GRP2, ATGRP2, GR-RBP2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo37571 No alias Glycine-rich RNA-binding protein RZ1A OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Spa_g22379 GRP2, ATGRP2, GR-RBP2 RNA editing factor *(ORRM3) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g57119 GRP2, ATGRP2, GR-RBP2 RNA editing factor *(ORRM3) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e012299_P004 CCR2, ATGRP7,... RNA chaperone (RZ1|GR-RBP) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000504 RRM_dom 9 77
No external refs found!