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  5. Solyc01g111240.4.1

Solyc01g111240.4.1 (ATTOC132, TOC132,...)


Aliases : ATTOC132, TOC132, Solyc01g111240

Description : component Toc90|Toc120|Toc132|Toc159 of outer envelope TOC translocation system


Gene families : OG0001034 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001034_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g111240.4.1
Cluster HCCA: Cluster_155

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00041p00174550 ATTOC132,... Protein translocation.chloroplast.outer envelope TOC... 0.02 OrthoFinder output from all 47 species
AMTR_s00045p00209230 PPI2, ATTOC159,... Protein translocation.chloroplast.outer envelope TOC... 0.03 OrthoFinder output from all 47 species
AT2G16640 ATTOC132, TOC132 multimeric translocon complex in the outer envelope membrane 132 0.06 OrthoFinder output from all 47 species
Adi_g113345 ATTOC132, TOC132 component *(Toc90/120/132/159) of outer envelope TOC... 0.02 OrthoFinder output from all 47 species
Cre17.g707500 ATTOC132, TOC132 Translocase of chloroplast 132, chloroplastic... 0.05 OrthoFinder output from all 47 species
Dde_g44638 ATTOC120, TOC120 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01017736001 PPI2, ATTOC159,... Protein translocation.chloroplast.outer envelope TOC... 0.02 OrthoFinder output from all 47 species
GSVIVT01024062001 ATTOC132, TOC132 Protein translocation.chloroplast.outer envelope TOC... 0.06 OrthoFinder output from all 47 species
Lfl_g05023 ATTOC132, TOC132 component *(Toc90/120/132/159) of outer envelope TOC... 0.03 OrthoFinder output from all 47 species
Msp_g47631 ATTOC132, TOC132 component *(Toc90/120/132/159) of outer envelope TOC... 0.02 OrthoFinder output from all 47 species
Ore_g02496 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g15640 ATTOC132, TOC132 component *(Toc90/120/132/159) of outer envelope TOC... 0.03 OrthoFinder output from all 47 species
Pnu_g17937 ATTOC132, TOC132 component *(Toc90/120/132/159) of outer envelope TOC... 0.03 OrthoFinder output from all 47 species
Pnu_g23465 ATTOC132, TOC132 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g30679 ATTOC120, TOC120 component *(Toc90/120/132/159) of outer envelope TOC... 0.02 OrthoFinder output from all 47 species
Spa_g54223 ATTOC132, TOC132 component *(Toc90/120/132/159) of outer envelope TOC... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003724 RNA helicase activity IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0008186 ATP-dependent activity, acting on RNA IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR006703 G_AIG1 732 865
IPR024283 TOC159_MAD 1069 1332
No external refs found!